| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2482 |
|---|
| Symbol | |
|---|
| ID | 7862016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2775022 |
|---|
| End bp | 2775648 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866578 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002882494 |
|---|
| Protein GI | 229820968 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0211915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.642006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGACA TCGTGCTGGC CGACGACCAC CCGGTGGTGC GGGCAGGCAT CCGTGCCGTC
GTCGAGAGCC AGCCGGACAT GCGGGTCGTG GCGGAGGTGA GCACGGCCGA GGAGCTCGTG
CGGCGGGTCC GGCTGGGTGT CGACGCCGAC GTCGTGCTGT GCGACCTCCG GTTCGGCCCC
GACGGGCTGG GTGGCGCCGA GGCGACGCGG GAGATCGTCG CGGCCGGCGG CCCCCCGGTG
CTCATCCTCA CGACGTACGA CACCGACGCC GACATCCTCG CCGCCATCGA GGCGGGAGCC
CGCGGCTACC TCCTCAAGGA GGCACCCACG GAGGAGCTCG CGCAGGCGAT CCGCGCGGCG
GCGGCGGGCG AGGTGGCGCT CGGCCCCGCC GTCCAGCGTC GGTTGCTCGG GCGGATGCGT
TCGCCCGGCC TCGCGCTCAC GCGCCGCGAG CTCGAGGTGC TCGAGCTGGT GGCACGCGGA
CGGTCGAACG ACGACGTCGC CCGCGAGCTG TTCCTGTCCC GGGCCACGGT GAAGACGCAT
CTCGCGCACG TCTACGACAA GCTCGGCGTC GACTCGCGGA CGGCGGCGGT CGCCGTCGCC
CGGCAGCGCG GTCTGCTGCG CGACTGA
|
|---|
| Protein sequence | MIDIVLADDH PVVRAGIRAV VESQPDMRVV AEVSTAEELV RRVRLGVDAD VVLCDLRFGP
DGLGGAEATR EIVAAGGPPV LILTTYDTDA DILAAIEAGA RGYLLKEAPT EELAQAIRAA
AAGEVALGPA VQRRLLGRMR SPGLALTRRE LEVLELVARG RSNDDVAREL FLSRATVKTH
LAHVYDKLGV DSRTAAVAVA RQRGLLRD
|
|---|
| |