| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2436 |
|---|
| Symbol | |
|---|
| ID | 7861970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2726673 |
|---|
| End bp | 2728154 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866532 |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_002882448 |
|---|
| Protein GI | 229820922 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.292704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.693712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC ACCCCTCCGG CGACGAGCAG GCCGACCCGG CCCGCGACGT CGTCGCCCGT
ATCCTCGCTC GCGCGGGCAC GGCGTTGCAG AGCACCGACG CGGCGCCCAC CGAGACCGAC
GGCGAACAGC TCGACGTCGA GGAGCGGTCG GCGCTGCGGC GGGTCACGGG ACTGTCGACC
GAGCTGCAGG ACGTCACCGA GGTCGAGTAC CGGCAGCTGC GGCTGGAGCA GGTGGTGCTC
GTCGGGCTCT GGTCCTCCGG TACCGCGGAG GGTGCGGAGA TCTCCCTGCG GGAGCTCGCG
GCGCTCGCGG AGACCGCCGG CTCCACGGTG CTCGACGGCG TGCTGCAGCG CCGCCGCACA
CCGGACCCGG GCACGTACCT CGGCTCCGGC AAGGCTGCCG AGCTGGCCGA CGTCGTCGCG
GCGACCGGAG CGGACACCGT CGTCGTCGAC GGCGAGCTGG CCCCGTCCCA GCGGCGCGGG
CTCGAGGACA TCGTCAAGGT CAAGGTCGTC GACCGCACCG CCCTGATCCT CGACATCTTC
GCGCAGCACG CGAAGTCCCG GGAGGGCAAG GGCCAGGTCG AGCTCGCGCA GCTCGAGTAC
CTGCTCCCGC GGCTGCGCGG GTGGGGCGAG TCGATGTCCC GGCAGGCCGG CGGTCGGGTC
GCCGGCGGCG CGGGCATCGG GTCGCGCGGA CCAGGTGAGA CGAAGATCGA GCTCGACCGC
CGCCGCATCC GCACCCGGAT GGCGAAGCTG CGCCGCCAGA TCGACCAGAT GGCGCCGTCG
CGGGCCACCA AGCGCGCCTC GCGGCACCGG GCGGAGGTCC CGTCCGTGGC GATCGCCGGG
TACACGAACG CGGGGAAGTC CTCCCTGCTC AACCGGCTGA CCGGCGCGGG TGTGCTGGTG
GAGAACGCGC TGTTCGCGAC GCTGGACCCG ACGGTGCGCC GCGCGCAGAC GCCGGACGGG
CGCGCCTACA CCCTCGCCGA CACCGTCGGC TTCGTCCGCG CCCTGCCGCA CGAGCTCGTC
GAGGCGTTCC GGTCGACGCT CGAGGAGGTC GGCGACGCCG ACGTGCTGCT CCACGTCGTC
GACGCGTCGC ACCCGGACCC GGAGAGCCAG ATCGCGGCCG TCCGCACGGT GCTCGCCGAC
ATCGAGGGAC TGACCGACAC CCCCGAGGTC CTCGTGCTCA ACAAGGCGGA CATCGCCGAC
GCCGAGGTCC TCACCCGCCT GCGCTCGGCC GGCCCGCACG TCGTCACCGT CTCCGCGCGG
ACCGGTGCCG GGATCGAGCA CCTGCGGGAC GTCGTCGCCG GCCTGCTGCC GCGTCCGGCG
GTCGAGGTCG ACGTCGTCGT GCCCTACGTC CGCGGTGACC TCGTGCACCG CGCGCACGCG
ACCGGCGAGG TCCTCGCCGA GGAGCACACG GCCGAGGGAA CGCACCTGCA GGCGCGGGTC
GACGCCGAGC TGGCGGCCGA CCTGGCCGAC GCGCTGCGCT GA
|
|---|
| Protein sequence | MSAHPSGDEQ ADPARDVVAR ILARAGTALQ STDAAPTETD GEQLDVEERS ALRRVTGLST
ELQDVTEVEY RQLRLEQVVL VGLWSSGTAE GAEISLRELA ALAETAGSTV LDGVLQRRRT
PDPGTYLGSG KAAELADVVA ATGADTVVVD GELAPSQRRG LEDIVKVKVV DRTALILDIF
AQHAKSREGK GQVELAQLEY LLPRLRGWGE SMSRQAGGRV AGGAGIGSRG PGETKIELDR
RRIRTRMAKL RRQIDQMAPS RATKRASRHR AEVPSVAIAG YTNAGKSSLL NRLTGAGVLV
ENALFATLDP TVRRAQTPDG RAYTLADTVG FVRALPHELV EAFRSTLEEV GDADVLLHVV
DASHPDPESQ IAAVRTVLAD IEGLTDTPEV LVLNKADIAD AEVLTRLRSA GPHVVTVSAR
TGAGIEHLRD VVAGLLPRPA VEVDVVVPYV RGDLVHRAHA TGEVLAEEHT AEGTHLQARV
DAELAADLAD ALR
|
|---|
| |