| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2435 |
|---|
| Symbol | |
|---|
| ID | 7861969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2724574 |
|---|
| End bp | 2726613 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866531 |
|---|
| Product | helicase c2 |
|---|
| Protein accession | YP_002882447 |
|---|
| Protein GI | 229820921 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.184328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.864461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTCC AGCAGCCGAC CGCGACCACG GCGGACGACG CCGACGAGGA GGCTGCCCGC
ACCCCCCGCG AGGCCCTGGA CGTCGACGCG CTGCTCGACG AGGTCGTCGC GCGGATGGGC
GGAACGCGCC GCGCCGGGCA GCACGAGATG GCGCTCGCCG TGGCGCACGC GTTCGACGAC
GGCGTCCCGC TCCTCGTGCA GGCGGGGACC GGTACCGGGA AGTCGCTGGC GTACCTCGTT
CCCGCCATCG TGCGGGCGGT GACGTCCGAC GAGCGGATCA TCGTCTCGAC GGCGACGCTC
GCCCTGCAGC GGCAGATCCT CACGAAAGAC CTGCCCCTCG CGCGCGGCGT CCTCGAGGCC
AGCCTCCCGC GGCCGCCGGC CGTCGCCCTG CTCAAGGGCT GGCACAACTA CGTGTGCCGG
CACAAGGTCA CCGGCGGGTA CCCGGCCGAG GACGAGCCTG GGCTCTTCTC GCTGGACGGC
GGTGCCGACC ACCCGCGGCG TTCGGCGGAG GTCGGCGAGT TCGAGACGCT GGGCGAGGAG
GTCGTCCGGC TGCGCGAGTG GGCGGAGGAG ACCACCACCG GCGACCGCGA CGACCTCGTG
CCGGGTGTGG GCGAACGAGC CTGGCGGCAG GTGTCGGTGA CGGCGATGGA GTGTCTCGGG
CAGAAGTGCC CGATGCTCGC CGAGTGCTTC CCCGAGGCGG CGCGGCGCGC CTCGCGCAGC
GCCGACGTCG TCGTGACCAA CCACGCGATG CTCGGGATCG CCGCCGGTGG CTCGCCGGGC
GTGCTGCCGG AGCACGACGG CCTCGTCGTC GACGAGGCGC ACGAGCTCGC GGACCGCGTC
ACCGCCCAGG CGACGGTCGA GCTGTCGGCG CCCGCCGTCG AGCGCGCTGC CCGTATCGCC
CGGCGGCACG CGGGTGCCGC CCTCGCCGGT CTGGACGACG CCGCACAGGC TCTGCGGACC
GGGCTCGGGC TCGTGCCGGA GGGGCGCCTG CCGGACGGTC TCCCGGAGTC GCTGGTCGGG
ACGGTGACGA CGCTCCGAGC CGCGGCGCAC GAAGGAATGA GCGCCCTCGG GCCGAACCCC
CCGGGGTCGA CGGACGGCGC CGGGGCGCTC GTGATGGCGC GCAGCGCGCT CCTGGTGCTC
GTGGAGATCG CCGACCGGCT GCTGTCGGAC GCCGTGGCGC AGCGACGCGA CGTGCTCTGG
TGCGAACGCG GCCGCGACGG CGCCAGTCGC CTGCGGGTCG CGCCGCTGGA CGTCGCGGGG
CTCGTGGCGA CGCATCTCGT GGCCGACCGG GCGGCTGTGC TCACGTCCGC CACGCTCGAG
CTCGGCGGGT CCTTCGCCCC CGTCGCCTCG TCGCTCGGCC TGGCGACCGG GGCCTACCGC
GCCGAGCGGG TCGCCAGCCC GTTCGACTAC GCCCGGCAGG GCATCAGGTA CGTCGCTCGG
CACCTCCCAC GGCCGGGTTC GGACGGACCG AGCCAGGAGA TGCTCGCCGA GCTCGCCGAG
CTCGTCCAGG CAGCCGGGGG GCGCACGCTC GGTCTCTTCT CGTCGCGGCG CGCGGCGGAG
GTCGCGGCGC AGGAGATCCG GGACCGCACC GGGCTGGACG TCCTGTGCCA GGGCGAGGAC
GTGCTGCCGA CGCTGGTGCG CCGGTTCGCC GAGGAGGAGG CCACGAGCCT GTTCGGCACG
CTGTCCCTCT GGCAGGGCGT GGACGTGCCC GGCGACTCGT GTCGTCTCGT GACGATCGAC
CGCATCCCGT TCCCGCGGCC GGACGACCCG GTGGGCGCCG CCCGCATGGA GGTCGTCGCG
GCGCGCGGCG GCAACCCCTT CATGACCGTC GCCGCCACGC ACGCCGCTCT GTTGCTCGCG
CAGGGCGCGG GACGCCTGCT GCGGCGGACC ACAGATCGGG GCGTCGTCGC GATCCTCGAC
TCCCGCCTGG CCACGGCGCG GTACGGCGAG TTCCTCTCGC GCTCGCTGCC GCCCATGTGG
CCCACCACCG ACCCGGCCGT GGCGCGCGCT GCACTCGTCC GACTGGGGTC CGACTCCTAG
|
|---|
| Protein sequence | MTLQQPTATT ADDADEEAAR TPREALDVDA LLDEVVARMG GTRRAGQHEM ALAVAHAFDD
GVPLLVQAGT GTGKSLAYLV PAIVRAVTSD ERIIVSTATL ALQRQILTKD LPLARGVLEA
SLPRPPAVAL LKGWHNYVCR HKVTGGYPAE DEPGLFSLDG GADHPRRSAE VGEFETLGEE
VVRLREWAEE TTTGDRDDLV PGVGERAWRQ VSVTAMECLG QKCPMLAECF PEAARRASRS
ADVVVTNHAM LGIAAGGSPG VLPEHDGLVV DEAHELADRV TAQATVELSA PAVERAARIA
RRHAGAALAG LDDAAQALRT GLGLVPEGRL PDGLPESLVG TVTTLRAAAH EGMSALGPNP
PGSTDGAGAL VMARSALLVL VEIADRLLSD AVAQRRDVLW CERGRDGASR LRVAPLDVAG
LVATHLVADR AAVLTSATLE LGGSFAPVAS SLGLATGAYR AERVASPFDY ARQGIRYVAR
HLPRPGSDGP SQEMLAELAE LVQAAGGRTL GLFSSRRAAE VAAQEIRDRT GLDVLCQGED
VLPTLVRRFA EEEATSLFGT LSLWQGVDVP GDSCRLVTID RIPFPRPDDP VGAARMEVVA
ARGGNPFMTV AATHAALLLA QGAGRLLRRT TDRGVVAILD SRLATARYGE FLSRSLPPMW
PTTDPAVARA ALVRLGSDS
|
|---|
| |