Gene Bcav_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2424 
Symbol 
ID7861958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2714024 
End bp2715271 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content74% 
IMG OID643866520 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002882436 
Protein GI229820910 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0565493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGAG GCCCTCGATC GGTCGCGGCT CGTCGCGACT GGGGTGACGA CGACGGCGGG 
ACGCCGATCC TGCACGTCGA CATGGACGCG TTCTTCGCGT CCGTCGAGCT CATCCGCGCG
CCGGACCTGC GGGGGCGCCC CGTGATCGTG GGCGGTGAGC ACCGGGGAGT GGTGCTCGCC
GCGACCTACG AGGCCCGCGC GTTCGGCGTC CACTCGGCGA TGCCGATGAC GCGGGCGCGG
GCGTTGTGCC CGCAGGCGGT CGTCATCCCG CCCGACCATG CCCGGTACGA GGAGGTCTCG
CGCGTCGTCA TGGGCCTGCT GGCCGACGTG ACGCCCGTCC TCGAGCAGGT GTCGGTCGAC
GAGGCGTTCC TCGACGTCTC GGGCGCGCGG CGCCGGCTCG GCTCCCCGGT CGCCATCGCG
ACGGCGATCC GCAGCCGCAT CCGGGAGGTG GCGCAGATCC CGGCGTCCGT CGGCGTCGCG
TCGACGAAGT TCCTGGCGAA GCTCGCGTCG CAGACGGCCA AGCCGGACGG GCTCCTCCTC
GTCCCGGAGG CGGCGAGCGT GCCGTTCCTC CACTCGCTGC CGGTGGGAGC GCTGTGGGGC
GTCGGCGAGC GGACCGCCGC CCAGCTGCGC GAGTGGGGGA TCGAGTCGGT CGAGCAGCTC
GCGCACACGC CACCCGACGT CCTGCAGCGC CGGCTCGGCC GGGCGGGTGG TGCCCGCCTG
TACGACCTGG CGTGGAACCG TGACCCTCGG CCGGTCACGG TGGCCCGGGT CGAGAAGTCG
ATCTCGTCCG AACACACGTT CGTGACCGAC GTCACCGACG CCGCCGAGCT CGGCCGGACC
CTGCTCGAGC AGGCCCATCG GTGCGCCCGG CGCCTGCGGC GGGGCGGGTT CCTCGCCCGC
GGCGTCACGA TCAAGGTCCG GATGTCCGAC TTCACCACGC TGACCCGGTC GCGGCAGCTG
GACCACCCGA GCGACGTCGC GCACGACGTG TACGCGGCCG CGCGCGCCCT GCTCGCGGCC
GTGACGATCC CGCGGGACGG GGTGCGCCTG CTGGGCGTCC GCGTGGACCA GCTGACCGCC
GCGGCAGCGA CGCCGGTGCA GCTCGCGCTC GACGACGACG CCGCCCCGCG TCGCGAGGTC
GAGGTCGCGA TGGACGACGT ACGGGACCGA TTCGGTGCCG ATGCACTGGG TGCGGCGTCG
TTGCTGGCGA CCTCGGCTTT CCCGACGGCC GAGCGGGACT TATCCTGA
 
Protein sequence
MSRGPRSVAA RRDWGDDDGG TPILHVDMDA FFASVELIRA PDLRGRPVIV GGEHRGVVLA 
ATYEARAFGV HSAMPMTRAR ALCPQAVVIP PDHARYEEVS RVVMGLLADV TPVLEQVSVD
EAFLDVSGAR RRLGSPVAIA TAIRSRIREV AQIPASVGVA STKFLAKLAS QTAKPDGLLL
VPEAASVPFL HSLPVGALWG VGERTAAQLR EWGIESVEQL AHTPPDVLQR RLGRAGGARL
YDLAWNRDPR PVTVARVEKS ISSEHTFVTD VTDAAELGRT LLEQAHRCAR RLRRGGFLAR
GVTIKVRMSD FTTLTRSRQL DHPSDVAHDV YAAARALLAA VTIPRDGVRL LGVRVDQLTA
AAATPVQLAL DDDAAPRREV EVAMDDVRDR FGADALGAAS LLATSAFPTA ERDLS