| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2381 |
|---|
| Symbol | |
|---|
| ID | 7858934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2670954 |
|---|
| End bp | 2671628 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643866477 |
|---|
| Product | SNARE associated Golgi protein |
|---|
| Protein accession | YP_002882393 |
|---|
| Protein GI | 229820867 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.273471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCGT TGCCCCTGAT CGCCGCCCCG GCGACGGACC CGTCCGCCGG CTACGACGGC
TTCATCGGCT GGGTGCTGTC CCTCATGGAG ACGCTCGGCG AGGTCGGCGT CGGCGTCGCC
GTCCTCATCG AGACGTTCTT CCCGCCGATC CCGTCCGAGG CCGTGCTCCC CGGCGCCGGG
TTCCTCGCGT GGGACGGCCG GATGAACGTG TGGTGGGCGA TCGTCGCGGC GACGCTCGGC
GCGCTCGTCG GCGCCTGGAT CTGGTACGCG GCCGGCGCCG CGCTCGGCCG GGACCGGACG
CGAGCGCTCA TCGGCCGGAT CTGGCTGCTC GAGACGAACG ACTTCGACCG CGCCGAGGCG
TTCTTCGCGC GGTGGGGCGG GGTCGCTGTC CTGTTCGGGC GGTGCGTCCC CCTCGTCCGG
AGCTTCATCT CCATCCCCGC CGGCATCGAA CGGATGCCGT TCTGGCGGTT CACCGGCTAC
ACCGCGCTCG GGTCCGGCGT GTGGAACGCG CTCTGGATCG GCCTCGGGTA CGGATTCGGC
CCGGCGATCA AGCCGGTGCT CGAGCGGTGG AGCGACGTGC TCAGCTATGC GGTGCTGGGC
GTCATCGCGC TGCTGGTCCT GTGGTTCATC CTCTCCCGGC TGCGCACGCG GGCACGGCAG
CGCGCCACGT CCTGA
|
|---|
| Protein sequence | MPPLPLIAAP ATDPSAGYDG FIGWVLSLME TLGEVGVGVA VLIETFFPPI PSEAVLPGAG
FLAWDGRMNV WWAIVAATLG ALVGAWIWYA AGAALGRDRT RALIGRIWLL ETNDFDRAEA
FFARWGGVAV LFGRCVPLVR SFISIPAGIE RMPFWRFTGY TALGSGVWNA LWIGLGYGFG
PAIKPVLERW SDVLSYAVLG VIALLVLWFI LSRLRTRARQ RATS
|
|---|
| |