Gene Bcav_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2340 
Symbol 
ID7861952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2621351 
End bp2622790 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content66% 
IMG OID643866433 
ProductFeS assembly protein SufB 
Protein accessionYP_002882353 
Protein GI229820827 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.198113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AAGCCACTCC GGCGACCGAG CCGATGACGC AGGACGAGAC CATCGCGTCC 
ATCGGCAACT ACACCTTCGG GTGGCACGAC ACGGACGTCG CGGGCGCGAC CGCGCAGCGC
GGCCTGTCCG AGGACGTCGT CCGGAACATC TCCGCGCTCA AGAACGAGCC CGAGTGGATG
CTGCAGCGGC GGCTCAAGGC GCTGCGGTTG TTCGACCGCA AGCCGATGCC CACCTGGGGC
GCCGACCTGT CGGACATCGA CTTCGACAAC ATCAAGTACT TCGTGCGGTC CACGGAGAAG
CAGGCCGCCT CGTGGGAGGA CCTGCCCGAG GACATCAAGA ACACGTACGA CCGGCTCGGC
ATCCCCGAGG CCGAGAAGCA GCGCCTCGTG GCGGGCGTCG CGGCGCAGTA CGAGTCCGAG
GTCGTGTACC ACCAGATCAA CGAGGAGCTC GAGCGGCAGG GCGTGCTCTT CCTCGACACG
GACACCGGGC TGCGCGAGCA CCCGGAGATC TTCGAGGAGT ACTTCGGCTC GGTCATCCCC
TCCGGTGACA ACAAGTTCGC GGCGCTCAAC ACGGCCGTGT GGTCCGGCGG GTCCTTCGTG
TACGTCCCGA AGGGTGTCCA CGTCGAGATC CCGCTGCAGG CCTACTTCCG GATCAACACG
GAGAACATGG GCCAGTTCGA GCGGACGCTG ATCATCGCGG ACGAGGGCTC GTACGTGCAC
TACGTCGAGG GCTGCACCGC GCCGATCTAC TCGAGCGACT CCCTCCACTC GGCGGTCGTC
GAGATCATCG TGAAGAAGGA CGCCCGCGTC CGGTACACGA CGATCCAGAA CTGGTCGAAC
AACGTGTACA ACCTCGTGAC GAAGCGCGCC ACGGCCGCGC AGGGCGCCAC CATGGAGTGG
ATCGACGGCA ACATCGGGTC GAAGGTCACG ATGAAGTACC CGGCCGTCTA CCTCATGGGC
GAGCACGCGC GCGGTGAGAC GCTGTCCATC GCGTTCGCGG GTGCCGACCA GCACCAGGAC
ACCGGCTCGA AGATGGTCCA CATGGCGCCG CACACGTCGA GCTCGATCGT GTCGAAGTCG
GTGGCCCGCG GCGGCGGCCG GGCGTCCTAC CGCGGTCTCG TCCAGGTGCT CGACGGCGCC
GAGGCGAGCA AGTCCAACGT GCTGTGCGAC GCGCTGCTCG TCGACACCGT CTCCCGCTCC
GACACGTACC CGTACGTCGA CGTCCGCGAG GACGACGTCG AGATGGGTCA CGAGGCGACG
GTCTCGAAGG TGAGCGAGGA CCAGCTGTTC TACCTCATGT CCCGAGGCAT GCCCGAGACC
GAGGCGATGG CCATGATCGT GCGCGGGTTC GTCGAGCCCA TCGCGCGCGA GCTGCCCATG
GAGTACGCCC TCGAGCTCAA CCGCCTCATC GAGCTTCAGA TGGAAGGGGC CGTGGGTTGA
 
Protein sequence
MTTEATPATE PMTQDETIAS IGNYTFGWHD TDVAGATAQR GLSEDVVRNI SALKNEPEWM 
LQRRLKALRL FDRKPMPTWG ADLSDIDFDN IKYFVRSTEK QAASWEDLPE DIKNTYDRLG
IPEAEKQRLV AGVAAQYESE VVYHQINEEL ERQGVLFLDT DTGLREHPEI FEEYFGSVIP
SGDNKFAALN TAVWSGGSFV YVPKGVHVEI PLQAYFRINT ENMGQFERTL IIADEGSYVH
YVEGCTAPIY SSDSLHSAVV EIIVKKDARV RYTTIQNWSN NVYNLVTKRA TAAQGATMEW
IDGNIGSKVT MKYPAVYLMG EHARGETLSI AFAGADQHQD TGSKMVHMAP HTSSSIVSKS
VARGGGRASY RGLVQVLDGA EASKSNVLCD ALLVDTVSRS DTYPYVDVRE DDVEMGHEAT
VSKVSEDQLF YLMSRGMPET EAMAMIVRGF VEPIARELPM EYALELNRLI ELQMEGAVG