Gene Bcav_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2253 
Symbol 
ID7861449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2532119 
End bp2533444 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content74% 
IMG OID643866345 
Producthypothetical protein 
Protein accessionYP_002882266 
Protein GI229820740 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.630202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCAGCACGGC CCCCAGGCCC GAGGACGAGG TCGTCCGGAT CTGCCGCGAG 
CTGATCCGGT TCGACACGTC GAACTACGGA GACGACTCCG GCCCGGGGGA GCGCGCCGCC
GCCGAGTACG TGATGGAGCA GCTCACCGAG GTCGGCTACG ACCCGGAGAT CGTGGAGTCG
GCGCCGCGCC GCTCGAGCGT GCTGCTGCGG ATCCCGGGGA CGGATCCCAC CCGTCCGGCC
CTCGTGGTGC ACGGCCACAC CGACGTCGTC CCGGCCGAGG CGTCCGACTG GAAGGTCGAC
CCGTTCGGCG GCGACGAGAT GGACGGTCTC GTGTGGGGCC GCGGCGCCGT CGACATGAAG
GACATGGACG CGATGATCCT CGCCGTCCTG CGGGACATGG CGCGCACCGG CTGGCGCCCG
CCGCGGGACC TCGTCATCGC GTTCTTCGCC GACGAGGAGG CGGGCGGGGC GCTCGGGGCC
CGCTGGGTGG TCGACAACCG GCCGGAGGTG TTCGAGGGGG CCACGGAGGC GATCAGCGAG
GTCGGGGGCT TCTCCGTGGA GGTCGACGGC CGCCGGGCCT ACCTGCTGCA GACGGCGGAG
AAGGGCATCG CGTGGCTGCG GCTGGTGGCC GACGGCACCG CCGGCCACGG CTCTCAGGTG
AACACGGACA ACGCCGTCAC CCGGCTCGCT GGCGCCGTCG CGCGCATCGG CGCGCACGCC
TGGCCACGGC ACCTCACGCC GACGGTGCGG GGCCTGCTCG ACGGCGTGGC GGACCTGACG
GGGACGTCGT GGAGCGAGGA CGACCCGGCG AGCGTGACGG CGCTCGTGGA CGCGCTCGGC
CCGGTCCGCA AGTTCGTCGG GGCGACGCTC GGTGCGAACG CGAACCCCAC GCAGCTCGAC
GCCGGGTACA AGGCGAACGT CGTGCCGGGC AGCGCCAGCG CGGCGATCGA CGTGCGGTTC
CTCCCCGGCC AGGAACAGGC GACGCTCGAC GCGGTCCGGG AGCTCGCGGG GCCGCACGTC
CGGCTTCAGG ACATCCACCG CGACGTCGCC CTCGAGGTGC CCTTCGCGGG AGGCCTCGTC
GACGCGATGG TGGCCTCGCT CGACGCGGAG GACCCCGGCG CCGTCGTCCT CCCGTACATG
CTCTCCGGCG GCACCGACAA CAAGTCGCTG TCGCGGCTCG GCATCACCGG CTACGGCTTC
GCGCCGCTGC GGCTGCCCGC CGACCTGGAC TTCGCCGGCA TGTTCCACGG CGTGGACGAG
CGCGTGCCCG TGGACGCGCT GCAGTTCGGG GTGCGCGTGC TCTCCCGACT TCTGCGGACC
TGCTGA
 
Protein sequence
MTTPSTAPRP EDEVVRICRE LIRFDTSNYG DDSGPGERAA AEYVMEQLTE VGYDPEIVES 
APRRSSVLLR IPGTDPTRPA LVVHGHTDVV PAEASDWKVD PFGGDEMDGL VWGRGAVDMK
DMDAMILAVL RDMARTGWRP PRDLVIAFFA DEEAGGALGA RWVVDNRPEV FEGATEAISE
VGGFSVEVDG RRAYLLQTAE KGIAWLRLVA DGTAGHGSQV NTDNAVTRLA GAVARIGAHA
WPRHLTPTVR GLLDGVADLT GTSWSEDDPA SVTALVDALG PVRKFVGATL GANANPTQLD
AGYKANVVPG SASAAIDVRF LPGQEQATLD AVRELAGPHV RLQDIHRDVA LEVPFAGGLV
DAMVASLDAE DPGAVVLPYM LSGGTDNKSL SRLGITGYGF APLRLPADLD FAGMFHGVDE
RVPVDALQFG VRVLSRLLRT C