Gene Bcav_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2116 
Symbol 
ID7859476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2384785 
End bp2387289 
Gene Length2505 bp 
Protein Length834 aa 
Translation table11 
GC content71% 
IMG OID643866208 
ProductKojibiose phosphorylase 
Protein accessionYP_002882131 
Protein GI229820605 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGCG ACGCGTACGG CATGCCCGAC CACCTCGACC GGGACCGCTT CCCGGTCGAC 
GAGTGGCGGC TGCGCGAGGT GCGCTTCTCC GCCGGCGACC AAGGCACCAC GGAGACGCTG
TTCTCGGTCG GCAACGGCTA CCTCGGCATG CGCGGCAACG TCGAGGAGGG CCGCGACAGC
TTCAGCCACG GCACGTTCAT CAACGGGTTC CACGAGACGT GGCCCATCCG GCACGCGGAG
GAGGCGTTCG GCTTCGCCCG GGTGGGGCAG ACCATCGTCA ACGTCCCGGA CACGAAGATC
CTGCGCCTGT ACGTGGACGA CGAGCCGTTG CTGCTCACCG TGGCCGACCT GCCCTCCTAC
GAGCGCACGC TCGACTTCGC GGACGGCACC CTGACGCGCG ACATCCTGTG GCGCACGCCC
GCCGGCAAGC ACGTCCGCGT GCGGTCACGG CGCATGGTGT CGTTCGCGCA GCGGCACCTC
GCGGTCATGA CGTACGAGGT CACGCTGCTC GACGCCGACG CCCCGGTCGC GATCTCGAGC
CAGATCCTCA ACCGCCAGGA CGGCAGCGAC GAGTACGCCG TGCGCGCCGC GGCGCTCGGC
TCCGGGTTCG ACCCGCGGCA GGCGGGCCGG CTCGCGGAAC GCGTCCTGCA GCCCGAGCTG
CAGTGGGAGG GCGAGGGCCG CTACGTCCTC GGCTACCGGT GCACGAACTC CGGGATGACG
CTGGCCGTCG CCGCCGACCA CACCATCGAG ACGGCGAACG AGGTCGAGGA GCTCAGCCAG
ATCGAGCCCG ACCTCGCCAA GCACGTGTAC CGCATCCGGG CCCGGCGCGG GGAGCCGATC
CTGGTGACGA AGGTGGTCAG CTACCACACG TCGCGGGGCA TCCCGGCGCG GGAGCTCGTC
GACCGGTGCC GGCGCACGCT GGACCGCGTC CGCGAGAACG GCACCCAGGA GACGTTCGCC
GAGCAGCGGT CCTGGCTCGA CGACTTCTGG GCGCGCAGCG ACGTCGTCCT CCACGGCCAG
CCCGCCGCCC AGCAGGCGAT CCGGTGGAAC CTGCTGCAGA TCGCGCAGGC GTCCGCGCGT
GCCGAGGGCA GCGGGATCGC GGCGAAGGGC GTCTCCGGCT CCGGGTACGG CGGGCACTAC
TTCTGGGACG GCGAGATCTA CGTCCTGCCG TTCCTCACGT ACACGATGCC GCGGGCCGCG
CGGAACGCGC TGCGCTTCCG GTACACGATG CTCGACGCCG CCCGCCGTCG CGCGTCCGAG
CTCAACCAGG ACGGGGCGCT GTTCCCGTGG CGGACGATCA ACGGTGAGGA GGCGTCCGCC
TACTACGCGG CGGGGACGGC GCAGTACCAC ATCGACGCCG ACATCTCGTT CGCGCTGTGC
CAGTACCTGA CGGCGAGCGG GGACGACGAC TTCCTCGCCC GGGAGGCGAT CGACGTCCTC
GTCGAGACCG CTCGGATGTG GGCCGACCTG GGGTTCTGGC GCGGGAACGG CGCGTGGGCG
TTCCACATCC ACGGCGTCAC GGGCCCCGAC GAGTACACGA CGGTCGTCAA CGACAACCTC
TACACGAACG TCATGGCCAG GTTCAATCTG CGTGCTGCTG CGACGGCCGT CGAACGGCTC
GCCGCAGCGG ACCCCGAGGC CTACCGGCAC ATGGTGACGC GGCTGCAGCT CGCCGACTCG
GAGGTCGCGG AGTGGGGCCG CGCCGCCGAT CACATGCACA TCCCGTTCGA CGCCCGGCTC
GGCATCCACC CGCAGGACGC GCAGTTCCTC GAGAAGGAGC TGTGGGACCT GTCGAACACG
CCGGCCGACA AGCGGCCGCT GCTGCTGCAC TACCACCCCC TGGTGATCTA CCGGTTCCAG
GTGCTCAAGC AGGCCGACGT CGTCCTGGCG CTCTTCCTCC AGGGTGACGG GTTCACGGCC
GAGGAGAAGC TCGCCGACTT CGACTACTAC GACCCGCTGA CCACCGGGGA CTCCACGCTC
TCTGCGGTGG TCCAGTCGAT CGTCGCGGCA GAGGTCGGCT ACCAGGAGCT CGCGCTGGAG
TACTTCGGCG ATGCCCTGTA CGTCGACCTC GCCGACCTGC ACGCGAACAC CGCCGACGGC
GTGCACGTCG CGTCCGCCGG GGGGATCTGG AGCGCGCTCG TGGCCGGGTT CGGCGGCATG
CGCGACGGCG GCGGCCAGGT CACGCTCGAC CCGCGCCTCC CCGAGCTGTG GGAAGGGCTG
ACGTTCCGGC TCACCCTGCA GGGCACGCGG GTCCGCGTGG ACCTGCGGCA GGAGGACCTC
ACGCTGACGG TCGAGCGGGG CACGGAGGCG ACGCTGCTGG TCCGGGGCGA GCGCGTGACG
GTGAGCGCCG AGGAACCGGT GCTCGTCCCG CTCGAGGACC AGGGGCCGCG GCTCATCGGC
GCACCCACCA CGCGCGACAT CGAGGGCACG CGGCGTGCGG ACGGGACGGT CATCGTCGCC
ACCGTCCCGG ACACGCACGA GGACGACGAG CACCTGTTCG GCTGA
 
Protein sequence
MRRDAYGMPD HLDRDRFPVD EWRLREVRFS AGDQGTTETL FSVGNGYLGM RGNVEEGRDS 
FSHGTFINGF HETWPIRHAE EAFGFARVGQ TIVNVPDTKI LRLYVDDEPL LLTVADLPSY
ERTLDFADGT LTRDILWRTP AGKHVRVRSR RMVSFAQRHL AVMTYEVTLL DADAPVAISS
QILNRQDGSD EYAVRAAALG SGFDPRQAGR LAERVLQPEL QWEGEGRYVL GYRCTNSGMT
LAVAADHTIE TANEVEELSQ IEPDLAKHVY RIRARRGEPI LVTKVVSYHT SRGIPARELV
DRCRRTLDRV RENGTQETFA EQRSWLDDFW ARSDVVLHGQ PAAQQAIRWN LLQIAQASAR
AEGSGIAAKG VSGSGYGGHY FWDGEIYVLP FLTYTMPRAA RNALRFRYTM LDAARRRASE
LNQDGALFPW RTINGEEASA YYAAGTAQYH IDADISFALC QYLTASGDDD FLAREAIDVL
VETARMWADL GFWRGNGAWA FHIHGVTGPD EYTTVVNDNL YTNVMARFNL RAAATAVERL
AAADPEAYRH MVTRLQLADS EVAEWGRAAD HMHIPFDARL GIHPQDAQFL EKELWDLSNT
PADKRPLLLH YHPLVIYRFQ VLKQADVVLA LFLQGDGFTA EEKLADFDYY DPLTTGDSTL
SAVVQSIVAA EVGYQELALE YFGDALYVDL ADLHANTADG VHVASAGGIW SALVAGFGGM
RDGGGQVTLD PRLPELWEGL TFRLTLQGTR VRVDLRQEDL TLTVERGTEA TLLVRGERVT
VSAEEPVLVP LEDQGPRLIG APTTRDIEGT RRADGTVIVA TVPDTHEDDE HLFG