Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2088 |
Symbol | |
ID | 7859368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2364113 |
End bp | 2364718 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643866180 |
Product | bifunctional deaminase-reductase domain protein |
Protein accession | YP_002882103 |
Protein GI | 229820577 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.810748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTGA CGACCACCAC GCAGGTCACC GTCGATGGAG TGATGCAGGC CAACGGCGGG CGAAACCCCG ACCTCGACCC TGGGTTCGAG CGCGGCGGGT GGGCCATCCC TCTGTTCGAC GACGAAGCCA TGGCGTACGT CGACCAGCAG TACCAGAGCG CTGACGCGTT CCTCTTCGGC CGGCGCACGT ACGAGCTCTT CGCCGGCTAC TGGGGTGCGA TGCAGCCGGG CAGCGGCCCC ATCGCCGACG CCCTGAACTC CGCTCCGAAG TACGTGGCGT CGACCACGCT CACCGACCCG GAATGGGCGA ACACCACCGT CCTCTCCGGT GACCTCGCGG CGGCCGTCGG GGAGCTGAGG TCCAGGCCAG GCGGGACGCT CAATGTGCCC GGCAGCGGCA GACTGATTCG CTGGCTGCTC GAGCACGACC TCGTCGACGA GGTGAACCTG CTCGTCTGCC CCGTCATCGT CGGCGCGGGT ACCCGCCTGT TCCCCGAGTC CGGCCCGGAC CTGGCGCTCC AGCTGGTCGA GTCGCGATCC TTCCCGAGGG GCATCACGCT CCAGGTCTAC CGGCCGGCCG GGCGCCCGCA GTACGCCGGC GCCTGA
|
Protein sequence | MKLTTTTQVT VDGVMQANGG RNPDLDPGFE RGGWAIPLFD DEAMAYVDQQ YQSADAFLFG RRTYELFAGY WGAMQPGSGP IADALNSAPK YVASTTLTDP EWANTTVLSG DLAAAVGELR SRPGGTLNVP GSGRLIRWLL EHDLVDEVNL LVCPVIVGAG TRLFPESGPD LALQLVESRS FPRGITLQVY RPAGRPQYAG A
|
| |