Gene Bcav_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2043 
Symbol 
ID7858663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2323532 
End bp2323804 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content66% 
IMG OID643866137 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_002882060 
Protein GI229820534 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.529768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00243953 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTGGAA CCGTCGCTGC CCCCGAGGGC ATCACCGATC CGCCCATCGA CGAGCTGCTC 
ACCGCTGCCG ACTCGAAGTA CGCGCTCGTG ATCTACGCCG CGAAGCGCGC GCGTCAGATC
AACGCGTACT ACGCGCAGCT GAACGAGGGC CTGCTCGAGT ACGTCGGCCC GCTCGTCGAG
ACCCGTAACC AGGAGAAGCC CCTCTCCATC GCGATGCGCG AGATCAACAA GGGCCTGCTC
ACGGTCGAGG CCACCGAGAG CACCGAGGAC TGA
 
Protein sequence
MSGTVAAPEG ITDPPIDELL TAADSKYALV IYAAKRARQI NAYYAQLNEG LLEYVGPLVE 
TRNQEKPLSI AMREINKGLL TVEATESTED