Gene Bcav_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2034 
Symbol 
ID7858654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2313394 
End bp2314392 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content73% 
IMG OID643866128 
Productaspartate carbamoyltransferase 
Protein accessionYP_002882051 
Protein GI229820525 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0341419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCACC TGCTGTCCGC CGCGGACCTC GGGCGCGACG AGGCCGTCGC CCTGCTCGAC 
ACCGCGGAGA CGATGGCCGA CACGCAGTCG AGAGCCATCA AGAAGCTGCC CCCGCTGCGC
GGCCTCACCG TGGTCAACCT GTTCTTCGAG GACTCCACGC GGACCCGGAT CTCGTTCGAG
GCGGCCGCGA AGCGGCTCTC GGCGGACGTC ATCAACTTCT CCGCGAAGGG GTCCAGCGTC
TCCAAGGGGG AGTCGCTCAA GGACACGGCG CAGACGCTGC AGGCGATGGG GGCGGACGCC
GTCGTCGTCC GCCACTGGGC CTCGGGCGCG CCGCACCGGC TCGCGCACGC AGGCTGGATC
GCCGCCCCGG TCATCAACGC CGGCGACGGC ACCCACCAGC ACCCGACGCA GGCCCTGCTC
GACGCGTTCA CGCTGCGCCG TCGCCTCGCC GGTCCCGACG GGCCCATCGG GACCGATCTC
GCCGGGCGGC ACGTCGTCGT CGTCGGCGAC GTCCTGCACT CCCGCGTCGC CCGCTCGAAC
GTCGACCTGC TCAGCACGCT CGGCGCCCGC GTGACGCTCG TCGCCCCGCC GACGCTGCTG
CCGGTCGGCG TCGAGAGCTG GCCGTGCGAG GTGGGCTACG ACCTCGACGC CGCGATCGAC
GCCGGACCCG ACGCCGTCAT GATGCTGCGC GTCCAGCGGG AGCGGATGAG CTCCGGGTTC
TTCCCGTCCG AGCGCGAGTA CGCGCGGGCC TACGGGCTCG ACGCCGCCCG CGTGTCCAGG
CTCGGGAAAC ACGCGCTCGT CATGCATCCC GGACCGATGA ACCGAGGGCT CGAGATCTCG
GCCGACGCGG CGGACTCCGC CCGCTCGACT GTCGTCGAGC AGGTCACGAA CGGCGTCTCC
GTGCGGATGG CCGTCCTGTA CACGCTGCTC GCGGGCGGCC CCGACGGCGA CTCGACCACC
AGCCCGGGCT CCGGCCCGGA GGGAGGCACC ACTCCATGA
 
Protein sequence
MRHLLSAADL GRDEAVALLD TAETMADTQS RAIKKLPPLR GLTVVNLFFE DSTRTRISFE 
AAAKRLSADV INFSAKGSSV SKGESLKDTA QTLQAMGADA VVVRHWASGA PHRLAHAGWI
AAPVINAGDG THQHPTQALL DAFTLRRRLA GPDGPIGTDL AGRHVVVVGD VLHSRVARSN
VDLLSTLGAR VTLVAPPTLL PVGVESWPCE VGYDLDAAID AGPDAVMMLR VQRERMSSGF
FPSEREYARA YGLDAARVSR LGKHALVMHP GPMNRGLEIS ADAADSARST VVEQVTNGVS
VRMAVLYTLL AGGPDGDSTT SPGSGPEGGT TP