| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2027 |
|---|
| Symbol | |
|---|
| ID | 7858647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2308956 |
|---|
| End bp | 2309525 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643866121 |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_002882044 |
|---|
| Protein GI | 229820518 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.954873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0836204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAGC TGGTCTACAC AGGGTTCATG TCCCTCGACG GGGTCGTGGA CTCGCCGGGA
GGGACGCAGG AGGGACACCG CAGCGGTGGA TGGGTCATGG ACACGCCGTT CGTGCCCGAG
GCCTTCGCCC TGAAGGGCGA GGAGCTGGAG AGCACCACGG CGCTGATGTT CGGCAGGCGG
AGCTACGAGG CGTTCGCGCC GGTCTGGAAG GACTCGGAGG ATCACGCCGC GTACCGGGAC
CTCCCGAAGT ACGTCGTCTC CTCCTCGCTT CCCGAGGAGG CGCTCGTCGA CGGGTGGGGG
ACGACGACGA TCCTGCGGTC CACCGACGAC GTCGCCGAGG CGAAGACGAC GGCGGGCGGC
GCGATCTTCA TCCATGGCAG CGCGGAGCTC GCGCGCCGGC TGTCGGAGGC GCGCCTGATC
GACCGCTACC ACCTGCTGGT CTTCCCCGTC CTGCTCGGTG CCGGCAAGGG CCTCTTCAGC
CGCGAGGACC TGGAGAAGCA GGCGCTGACG CTGCGCGACA GCACCGCCTA CCCGAACGGG
ATCGTGAAGC TGATCTACGC CGTCGGCTGA
|
|---|
| Protein sequence | MRELVYTGFM SLDGVVDSPG GTQEGHRSGG WVMDTPFVPE AFALKGEELE STTALMFGRR
SYEAFAPVWK DSEDHAAYRD LPKYVVSSSL PEEALVDGWG TTTILRSTDD VAEAKTTAGG
AIFIHGSAEL ARRLSEARLI DRYHLLVFPV LLGAGKGLFS REDLEKQALT LRDSTAYPNG
IVKLIYAVG
|
|---|
| |