| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2024 |
|---|
| Symbol | |
|---|
| ID | 7858644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2306510 |
|---|
| End bp | 2307334 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643866118 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002882041 |
|---|
| Protein GI | 229820515 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0525538 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCG GGGAGTTCCG GAGGCGGCAC CGTCCCGGTG CCCCGCTCCT GCTGCCGAAC
GCCTGGGACC TCGCGTCCGC CCGGTGGTTG GTCGGCGCAG GGTTCGACGT CGTCGGGACC
ACGAGCCTCG GCGTCGCGTT CGCCGCCGGC AAGCCGGACG GCTCCGGCGC GATCGCCGAG
GAGACATCCG CCCTCGCCAG CACGCTCACG AGGGCGGGCA TCGCCGTCAC CGTCGACATC
GAGGCCGGCT TCTCCGACGA CCCGGACGAC GTCGGCCGGT ACGCCTCCCG CCTCGCCGCG
CTCGGCGTCG TCGGCCTCAA CCTCGAGGAC TCCGACGGTC GCGGAGGTCT GGTCGACGTG
GACCTCGCCG TCGCGAAGGT CGCGGCCGTC GCGCACGCGG CGCCCGAGGT GTTCCTCAAC
GCCCGGACCG ACCCGTTCTG GTTGGCGCGC GGGGATCCGG CCGCCGACCT GGCGGCCGCC
GAGGGAACTG CCCTGGAGCG CGGGGTGGCG TACGTCGCCG CCGGGGCGTC CGGCGTGTTC
GTTCCGGGTG CTCTGCCACC GGCGACGATG CGCACGCTCG CCGCCCAGCT CCCGGCCCCC
CTGAACGTCC TCGTCCAGGA GCGGCTGGGC GTCGCGGAGC TGGCGCGGTC CGGGGTCGCC
CGCGTCAGCA CCGGGTCCCT GCTGTTCCGC AGCGCTCTCG CGGCCGTGCG CGACGGCGCC
GCGGCACTGC GGGGCGTGCC GCCGGCGGGG GTGCCGTCGT ACGACGATGT GGCGGGCGCC
GGGGCCACCG ATCGGGGGAT GGGCGACGTC GAGGAGTCCG GATAG
|
|---|
| Protein sequence | MSPGEFRRRH RPGAPLLLPN AWDLASARWL VGAGFDVVGT TSLGVAFAAG KPDGSGAIAE
ETSALASTLT RAGIAVTVDI EAGFSDDPDD VGRYASRLAA LGVVGLNLED SDGRGGLVDV
DLAVAKVAAV AHAAPEVFLN ARTDPFWLAR GDPAADLAAA EGTALERGVA YVAAGASGVF
VPGALPPATM RTLAAQLPAP LNVLVQERLG VAELARSGVA RVSTGSLLFR SALAAVRDGA
AALRGVPPAG VPSYDDVAGA GATDRGMGDV EESG
|
|---|
| |