Gene Bcav_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1988 
Symbol 
ID7858608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2267670 
End bp2268272 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content72% 
IMG OID643866082 
ProductSNO glutamine amidotransferase 
Protein accessionYP_002882005 
Protein GI229820479 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00558528 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACTG TCGGCGTCCT CGCCCTGCAG GGCGACTTCC GCGAGCACAT CGCCGTCCTG 
GGCTCCCTCG GTGTGAGCGC GGTCCCCGTG CGCCGGCCGA GCGAGCTCGA CGTCGACGGC
CTCGTGCTCC CGGGCGGCGA GTCCACGACG ATCTCCAAGC TCCTCGTGAC GTTCGGGCTC
CTCGAGCCCC TGCGCGAGGC GGTGCGCTCG GGGCTCCCGG TGTACGGCTC GTGCGCAGGC
ATGATCCTGC TCGCGGACCG GATCCTCGAC GGCACCGTGG ATCAGGAGAC CATCGGGGGC
ATCGACATGA CGGTGCGCCG CAACGCGTTC GGGCGGCAGG TCGACTCCTT CGAGGTGGAT
CTCGACGCGC CGGGCCTCGC GGGCGAGGCC GGGTCCGAGC TGCTGCGCGC CGTCTTCATC
CGGGCACCGT GGGCGGAGGA CGTGGGGGAC GGCGTCGAGG TCCTCGCGCG CGTCGCGAGC
GGCCCGGCCG CCGGTAGAAT CGTGGCAGTA CGTCAGGGCT CGCTGCTGGC CACCGCTTTC
CATCCGGAGA TCGGCGCGGA CGCGAGGGTG CACTCCACCT TCCTCCGGAT GATCGGTGCG
TGA
 
Protein sequence
MTTVGVLALQ GDFREHIAVL GSLGVSAVPV RRPSELDVDG LVLPGGESTT ISKLLVTFGL 
LEPLREAVRS GLPVYGSCAG MILLADRILD GTVDQETIGG IDMTVRRNAF GRQVDSFEVD
LDAPGLAGEA GSELLRAVFI RAPWAEDVGD GVEVLARVAS GPAAGRIVAV RQGSLLATAF
HPEIGADARV HSTFLRMIGA