| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1986 |
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| Symbol | |
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| ID | 7858606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2266139 |
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| End bp | 2267062 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643866080 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_002882003 |
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| Protein GI | 229820477 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0062931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCGTTG CACCGCTCGA CCCCACCGCG CCCGCACCGG CGTCCGGAAC CGGCACCGCC
CGCGTCAAGC GGGGCATGGC CGAGATGCTC AAGGGCGGCG TCATCATGGA CGTCGTCACC
GCCGACCAGG CGAAGATCGC CGAGGACGCC GGCGCCGTCG CCGTGATGGC GCTCGAGCGC
GTCCCGGCCG ACATCCGCGC CCAGGGCGGG GTCTCCCGGA TGAGCGACCC CGACATGATC
GACGGCATCG TCGCCGCCGT CTCGATCCCC GTGATGGCGA AGGCGCGCAT CGGGCACTTC
GTCGAGGCGC AGGTGCTTCA GAGCCTCGGC GTCGACTACG TGGACGAGTC CGAGGTCCTC
ACGCCGGCCG ACTACGCGCA CCACATCGAC AAGTGGCAGT TCACCGTGCC GTTCGTCTGC
GGAGCCACGA ACCTCGGGGA GGCGCTCCGG CGCATCACCG AGGGTGCCGC GATGATCCGG
TCGAAGGGCG AGGCCGGGAC GGGCGACGTC TCGAACGCCA CCACGCACAT GCGCACCATC
CGCGACGAGA TCCGCCGCCT GACCTCGCTG CCCGAGGACG AGCTGTATCT CGCCGCGAAG
GAGCTCCAGG CGCCGTACGA CCTCGTCGCC GAGGTGGCGC GCGAGGGGAA GCTCCCCGTG
GTCGTCTTCA CCGCCGGCGG GATCGCCACC CCGGCCGACG CCGCGATGAT GATGCAGCTC
GGCGCCGAGG GCGTGTTCGT CGGCTCCGGG ATCTTCAAGT CCGGGAACCC CGCCGAGCGC
GCGGCGGCGA TCGTCCAGGC CACGACGTTC TTCGACGACC CCGACGTCAT CGCGAAGGTC
TCCCGCGGCC TCGGCGAGGC GATGGTCGGC ATCAACGTCG ACGACATCCC GGTCCCGCAC
CGCCTGGCCG AGCGCGGGTG GTGA
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| Protein sequence | MSVAPLDPTA PAPASGTGTA RVKRGMAEML KGGVIMDVVT ADQAKIAEDA GAVAVMALER
VPADIRAQGG VSRMSDPDMI DGIVAAVSIP VMAKARIGHF VEAQVLQSLG VDYVDESEVL
TPADYAHHID KWQFTVPFVC GATNLGEALR RITEGAAMIR SKGEAGTGDV SNATTHMRTI
RDEIRRLTSL PEDELYLAAK ELQAPYDLVA EVAREGKLPV VVFTAGGIAT PADAAMMMQL
GAEGVFVGSG IFKSGNPAER AAAIVQATTF FDDPDVIAKV SRGLGEAMVG INVDDIPVPH
RLAERGW
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