| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1979 |
|---|
| Symbol | thrS |
|---|
| ID | 7858599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2258661 |
|---|
| End bp | 2260676 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643866073 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_002881996 |
|---|
| Protein GI | 229820470 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000566637 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGACA TCCGCGTCCA CCTCGACGGC GCCCCTCGCG ACCTCGAGGC GCCGGCGACG
GGCACGACGG CGTACGCCGA CGATCGCACC GTCGTCGCCC TCCGCGTCGA CGGTGAGCTG
CGTGACCTCG ACACGCAGCT GCGCGACGGC GCCCACGTCG AGGGCGTGAC GATCGACTCC
CCGGACGGCC TCGCGATCCT GCGGCACTCG ACGGCGCACG TCCTCGCACA GGCCGTGCAG
CAGGTGAACC CGGACGCGAA GCTCGGCATC GGCCCGCCGA TCACCGACGG CTTCTACTAC
GACTTCGACG TCGAGACCCC GTTCACGCCC GAGGACCTCA AGGCACTCGA GAAGGCGATG
GCGCGCATCG TCAAGGAGGG TCAGACGTTC CGCAGGCGCG TCGTCTCCGA CGACGAGGCG
CGGGCCGAGC TCGCCGACGA GCCGTACAAG CTCGAGCTGA TCGGGCTCAA GGGCCCCGGG
GCGGCATCCG CTGCCGAGGG CGCCGGGGCG GAGGTCGGTG CGGGCGAGCT GACGATCTAC
GACAACGTGC GCGGCGCCGG CCGTGAGACC GAGACGGTGG TGTGGAAGGA CCTGTGCCGC
GGCCCGCACC TCCCGAGCAC CCGCCTGATC GGCAACGGCT TCTCGCTCAT GCGGTCCGCC
GCCGCGTACT GGCGCGGGAG CGAGAAGAAC CCGCAGCTGC AGCGCGTTTA CGGCACGGCC
TGGCCGACGA AGGACGACCT GCGCGCCCAC CTCGAGCGTC TCGCGGAGGC GGAACGTCGC
GACCACCGGC GTCTCGGCAG CGAGCTCGAC CTGTTCTCCG TCCCCGAGGA GATCGGCTCG
GGGCTCGCCG TCTTCCACCC GAAGGGCTCC GTCATCCGGA TGGAGATGGA GGACTACTCG
CGTCGCCGGC ACGTCGAGGC CGGGTACGAC TTCGCGTACA CGCCGCACAT CACGAAGGCG
CACCTCTTCG AGACCTCGCG GCACCTCGAG TGGTACGCCG ACGGCATGTA CCCGCCGATG
CAGCTCGACG CCGAGCACCA CGAGGACGGG ACGCTGAAGC GCGAGGGGCA GGACTACTAC
CTCAAGCCGA TGAACTGCCC GATGCACAAC CTCGTGTTCG CGGCGCGCGG CCGCTCCTAC
CGCGAGCTGC CGCTGCGGCT GTTCGAGTTC GGGACCGTCT ACCGGTACGA GAAGTCCGGC
GTCGTGCACG GTCTGACGCG GGCCCGGGGG TTCACCCAGG ACGACGCGCA CATCTACTGC
ACCCGGGAGC AGATGCGCGA CGAGCTCGCC TCGCTCCTGA CGTTCGTGCT CGACCTGCTG
CGCGACTACG GCCTCGAGGA GTTCTATCTC GAGCTCTCCA CGCGCGACCC GGAGAAGTCC
GTCGGTGACG ACGCGACGTG GGACGAGGCG ACCGCCACGC TGCGCGACGT CGCGACGGCG
TCCGGCCTGG AGCTCGTGGA CGATCCGGGC GGCGCCGCGT TCTACGGCCC GAAGATCTCG
GTCCAGGCGC GCGACGCGAT CGGCCGCTCG TGGCAGCTGT CGACGATCCA GCTCGACTTC
TTCGAGCCCG GGCTGTTCGA CCTGGAGTAC ACGGCGAGCG ACGGTTCGCG GCAGCAGCCC
GTCATGATCC ACCGCGCGCT GTTCGGATCC ATCGAGCGGT TCTTCGCGAT CCTGCTCGAG
CACTACGCGG GCGCGATGCC GCCGTGGCTC GCGCCGGTCC AGGTCCGCGC CGTGCCGGTG
GCCGAGCCGT TCAACGCCTA CCTCGCCGAC GTCGTCGCGC AGCTCCGTGC CGCGAGCGTG
CGCGCCGAGC TGGACGACGG CGACGACCGC TTCAACAAGA AGATCCGGAC GGCGACGACG
CAGAAGATCC CGTTCGTGCT GATCGCGGGC GGCGAGGACG CCGAGGCGGG CGCCGTCTCG
TTCCGCTACC GGGACGGGAC ACAGCGCAAC GGCGTCCCCG TCGCCGAGGC GATCGCGATC
GTCACGGCAG CGATCGCGGA TCGCGTGCAG GTCTGA
|
|---|
| Protein sequence | MPDIRVHLDG APRDLEAPAT GTTAYADDRT VVALRVDGEL RDLDTQLRDG AHVEGVTIDS
PDGLAILRHS TAHVLAQAVQ QVNPDAKLGI GPPITDGFYY DFDVETPFTP EDLKALEKAM
ARIVKEGQTF RRRVVSDDEA RAELADEPYK LELIGLKGPG AASAAEGAGA EVGAGELTIY
DNVRGAGRET ETVVWKDLCR GPHLPSTRLI GNGFSLMRSA AAYWRGSEKN PQLQRVYGTA
WPTKDDLRAH LERLAEAERR DHRRLGSELD LFSVPEEIGS GLAVFHPKGS VIRMEMEDYS
RRRHVEAGYD FAYTPHITKA HLFETSRHLE WYADGMYPPM QLDAEHHEDG TLKREGQDYY
LKPMNCPMHN LVFAARGRSY RELPLRLFEF GTVYRYEKSG VVHGLTRARG FTQDDAHIYC
TREQMRDELA SLLTFVLDLL RDYGLEEFYL ELSTRDPEKS VGDDATWDEA TATLRDVATA
SGLELVDDPG GAAFYGPKIS VQARDAIGRS WQLSTIQLDF FEPGLFDLEY TASDGSRQQP
VMIHRALFGS IERFFAILLE HYAGAMPPWL APVQVRAVPV AEPFNAYLAD VVAQLRAASV
RAELDDGDDR FNKKIRTATT QKIPFVLIAG GEDAEAGAVS FRYRDGTQRN GVPVAEAIAI
VTAAIADRVQ V
|
|---|
| |