| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1968 |
|---|
| Symbol | |
|---|
| ID | 7858361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2243394 |
|---|
| End bp | 2244458 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643866058 |
|---|
| Product | AFG1-family ATPase |
|---|
| Protein accession | YP_002881985 |
|---|
| Protein GI | 229820459 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1485] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.486857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000116257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCACG TGCCGCGCGC CGCGTCCGTG CCCGACGCCC CGAGGGTGCA GGGCACGGTG
ACCGTCTCCC TGACCGATCG GGTGCCCGCG CCGAACGCGC ACGACCTCCT CGCCTCCCTC
GTGCCCCCGC CGCAGTTCGC GCAGGCCCGG TTCGCCACGT ATCAGCCGGA CCCGGCGCAC
CCGTCGCAGG CCGCCGCCCT GGCCCGGGTG GAGCAGGTCG CGGCGGAGGT GGCGTCGGCG
TCGTCGCGGC GGCTGTTCGG GCGTCGCGCC GCGCGGACCG AGGGACGCGG CCTCTACCTC
GACGGCGGCT ACGGCGTGGG CAAGACGCAT CTCCTGGCCT CGCTCGCACA CGCCGTCGGG
CAGGAGCGCG CCGCGTACGG CACGTTCGTC GAGTACACCC ACCTCGTCGG CGCGCTGGGG
TTCGCGGCGT GCGTGGAGGC CCTGAGCGGG TTCGCCGTGG TGGGGATCGA CGAGTTCGAG
TTGGACGACC CCGGCGACAC CCTCCTGATG TCCCGCCTGC TGCGCGAGCT CACGGACCGC
GGCGTCCGCC CCGTCGCGAC GTCGAACACC CTGCCGGAGG CTCTCGGCGC CGGCCGGTTC
GCGGCGGAGG ACTTCCTGCG CGAGATCCAG GCGCTGGCGG GCCGGTTCGA CGTCCTGCGG
CTCGACGGCG AGGACTACCG GCACCGCAGC GGGCTCCCGT CCGGCGAGGC GGCGGGCGAC
GACGCGGTCC GCGCCGCCGT CGCCGCCATG CCGGGTGCGT CGCTAGACGA GTTCGACGGC
GTGCTCGCGC ACCTCGCCCG GCTGCACCCG TCCCGCTACG GGGCGCTCGT CGACGGGCTC
CCGCTCGTCG GGCTCACCGG CGCGCACCCC GTGGACGACG ACCTCGTGGG CCTGCGCCTC
GTCGTGCTCG TGGACCGCCT CTACGACCGT GACGTGCCGG TGCGCCTCGG CGGCACCGCC
CCGCGCGACA TCTTCAGCGA GCGCATGCTC TCGGGCGGCT ACCGCAAGAA GTACTACCGG
GCCCTGTCGC GGCTCGGCGC GCTCACCACG CGGCCGGTCC GCTGA
|
|---|
| Protein sequence | MSHVPRAASV PDAPRVQGTV TVSLTDRVPA PNAHDLLASL VPPPQFAQAR FATYQPDPAH
PSQAAALARV EQVAAEVASA SSRRLFGRRA ARTEGRGLYL DGGYGVGKTH LLASLAHAVG
QERAAYGTFV EYTHLVGALG FAACVEALSG FAVVGIDEFE LDDPGDTLLM SRLLRELTDR
GVRPVATSNT LPEALGAGRF AAEDFLREIQ ALAGRFDVLR LDGEDYRHRS GLPSGEAAGD
DAVRAAVAAM PGASLDEFDG VLAHLARLHP SRYGALVDGL PLVGLTGAHP VDDDLVGLRL
VVLVDRLYDR DVPVRLGGTA PRDIFSERML SGGYRKKYYR ALSRLGALTT RPVR
|
|---|
| |