| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1959 |
|---|
| Symbol | |
|---|
| ID | 7858352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2233948 |
|---|
| End bp | 2234664 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866049 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002881976 |
|---|
| Protein GI | 229820450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000168235 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCGG CCTCTGCCGG GGCGACATCG CGGCACGGCC GGTACTCTCG GGCCGTGGCC
TCCACCGCCG TCGGATCGCT CGACCACGAC GCCGTCGTCC GCGCGGCCGA GCAGGCGGTC
GACCTCGCCC GTCACGACGC GGTGGTCGCC GCCTGGGGCA CGGAGTCCGC GCTGCCCGGG
ATGACGGTCG GTGGGCTCGC CCGACACCTC GTGAGCCAGC CGGAGTGCGC CGTCGAGTTC
CTCGGCCTGC CGGTGCCGGC GGGCGCGGAG CGCGTGCCGC TCTCGGTGTA TGCCGGACTC
CTCGACTGGC TCGACGCCCC GGTGGACGCC GAGGAGAACA CCTCGATCCG CGACGACTTC
AACGAGATGG CCGGGGAAGG CTACGAGGCG TCGATCGCCG TCGGCGACGC CGCCTGTGCC
GCACTGCCCG AGGCGATCCG CGCTGCCGGC CCCGCGACGT TCGTGCCGTG GCAGGGCTGT
GCCCTCGCCA CGGACGACTT CCTGCTGGTC CGGCTCCTCG AGATCGTCGT GCACACCGAC
GACCTGGCGA CGAGCCTCGG CCTCCCGACA CCGCGGTTCG AGCCGGCCGT CCTCGAACCG
GTCCTCGGGC TGCTCGCCGT GCTGGCGCAG CGGCGGCACG GGCAGGACGC CGTCGTGCGC
ACGCTCGCTC GCGCCGAGCG GGCGGGCGGA ACCGTGTCGG CGTTCTCCCG AGCCTGA
|
|---|
| Protein sequence | MHPASAGATS RHGRYSRAVA STAVGSLDHD AVVRAAEQAV DLARHDAVVA AWGTESALPG
MTVGGLARHL VSQPECAVEF LGLPVPAGAE RVPLSVYAGL LDWLDAPVDA EENTSIRDDF
NEMAGEGYEA SIAVGDAACA ALPEAIRAAG PATFVPWQGC ALATDDFLLV RLLEIVVHTD
DLATSLGLPT PRFEPAVLEP VLGLLAVLAQ RRHGQDAVVR TLARAERAGG TVSAFSRA
|
|---|
| |