Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1957 |
Symbol | |
ID | 7858350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2229798 |
End bp | 2231867 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643866047 |
Product | Amylo-alpha-16-glucosidase |
Protein accession | YP_002881974 |
Protein GI | 229820448 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.705949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000163059 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCAACGC AGGTCGGGAC ACCTCGGCAG CCGTTCCTGG ACTCGTTGGT CGTGGCCCTG GCCGCGCCGA CCCAGGCCTG GTCGGGAGCG GACGGGCAGA TCCGGCACGG CGGCGCCCAC GGTGTCTTCC ACGGTGACGT GCGCGCCCTC GCCCGCGCCG AGCTGCTGGT CGCCGGCGAG GAGCCCGAGG TGATCGCGGC GGGTCCGCAG GGCCGCGGCC GCGTGCACGT CGTCGCCCTC GCGCGGGGGA TCGACGCCGC GGGGGCCGAT CCCACGGTGC GCCTCGACCG GGTGCGCCGG GTGGAGCCCG GCGCCGTGCG CGAGGACATC ACCGTGACGT GTGCCGTGCC GGGCACCGCC AGGGGTCGCC TCGAGATCGT CCTCGGCAGC GATCTCGCGG ACATGGACGC CGTGAAGGCC GGGCGGACCC CGGCTCTTCT CCCGGTGCAC GCTGACGGCG ATCGCCTCAC CTGGGCCGCG GCCGGGGTGA GCGTCGCTGT GGAGGCGCCC GGCGCCGTCG TCGACGCGCG GGACCTCGCC GCTCCCCGGA TCGCCTGGGA CGTCGAGGTC ACGCAGCGCG CACCGGTGAC GCTCTCGTGG ACCCTGACGG CCACGGACTC CGCCGCCGTC GTCGTCCCCG CCCGAGGCCC GGTGCCGTGG TCAGCACCCA CGCTCGAGGC GGACGACCAC CGCCTCGCTC CGTGGCTCGA ACGCTCGCTG GAGGACCTGG CGAGCCTGCG CATGGCGACG ACCGAGCTGC CCGACGACGA GTTCCTCGCG GCCGGCGCGC CGTGGTTCTT CACGTTGTTC GGCCGCGACT CCCTGTGGGC AGCGCGCATG CTGCTCCCGC TGGGCACCGG ACTGGCCCGC GGCACGCTCC GCACGCTCGC GGCCGGCCGC GGCCGCCGGG AGGACGCGGC GACGGGTGAG CAGCCGGGCA AGGTGCTGCA CGAGGTGCGT CGTGCCGGCA TCGGGATCGA CGACGGCGCC CGCCTGCCAC CGGTGTACTT CGGCACCATC GACGCCACCC CGTTGTGGAT CGTGCTCCTG CGCGACGCCT GGCGCTGGGG CCTGCCGGCC GACGACGTCG CCGAGCTGCT GCCGGCCCTG GAGGACACGC TCGGCTGGCT CGACGCCCAG GTCTCCGACT CCGACGGCGT CGCGGGCTTC CTGCGGTACG AGGACCGGAC GGGGGCCGGG CTCGCGAACC AGGGCTGGAA GGACTCGGGC GACTCCGTGC AGTGGCGCTC CGGCGAGCTG GCGCAGCCGC CGATCGCGCT GGCCGAGGTG CAGGCGTACG CGTACGAGGC GGCGCTGGCG GGAGCCGAGC TGCTGGCGGC GTTCGACCGT CCGGGCGCCG ACGCGTGGCG GGACTGGGCG GACCGGCTCG CGCGGCGGTT CCGGTCGGCG TTCTGGGTCA CCGTCGACGG CGAGCGGTAT CCGGCGATCG CGCTCGACGC GACCGGCAGC GCCGTCGACA GCTTGACGTC GAACCTCGGC CACCTCCTCG GGACGGGCCT GCTCGACGCC GACGAGGAGC GGGTCGTGGC CTCGCACCTC ACCGACCCGC GCCTGGACTC CGGCTACGGC CTGCGCACGC TGGCGGCGGG CTCCGGAGGG TACTGGCCGC TGCGCTATCA CGGGGGTGCC GTCTGGCCCC ACGACACGGC GATCGCCGTG CGCGGGCTCG CGCGTGCGGG GTTCGCCGCG GAGGCCGAGC ACCTGGCGTC GGGCCTCGTC CGTGCCGCTC CCGACCTCGA CTACCGCCTG CCCGAGCTGT GGTCCGGCGA CGCCGCGGGC ACCGTGCCCA CCGTCGTGCC GTACCCGGCC GCGTGCCGCC CGCAGGCGTG GTCGGCGGCC GGGGCCGTCG CGGTGCTGCA GTCGGTCCTC GGGATCGAGG CGGACGTCCC GGCGGGTGTC GTGCGGGTGC GGGCCCGCCC CGGACCGCTC GGCGCCCTGG CGTGGGGCGG GCTGCGCGCC GGGAACGGGG TGCTCGACGT CGCCCGGGCG GCCGACGGCC GGGTGACGGC TCGTGCGGAG GGCGACGGCG TCGAGGTTCG CGTGGAGTGA
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Protein sequence | MATQVGTPRQ PFLDSLVVAL AAPTQAWSGA DGQIRHGGAH GVFHGDVRAL ARAELLVAGE EPEVIAAGPQ GRGRVHVVAL ARGIDAAGAD PTVRLDRVRR VEPGAVREDI TVTCAVPGTA RGRLEIVLGS DLADMDAVKA GRTPALLPVH ADGDRLTWAA AGVSVAVEAP GAVVDARDLA APRIAWDVEV TQRAPVTLSW TLTATDSAAV VVPARGPVPW SAPTLEADDH RLAPWLERSL EDLASLRMAT TELPDDEFLA AGAPWFFTLF GRDSLWAARM LLPLGTGLAR GTLRTLAAGR GRREDAATGE QPGKVLHEVR RAGIGIDDGA RLPPVYFGTI DATPLWIVLL RDAWRWGLPA DDVAELLPAL EDTLGWLDAQ VSDSDGVAGF LRYEDRTGAG LANQGWKDSG DSVQWRSGEL AQPPIALAEV QAYAYEAALA GAELLAAFDR PGADAWRDWA DRLARRFRSA FWVTVDGERY PAIALDATGS AVDSLTSNLG HLLGTGLLDA DEERVVASHL TDPRLDSGYG LRTLAAGSGG YWPLRYHGGA VWPHDTAIAV RGLARAGFAA EAEHLASGLV RAAPDLDYRL PELWSGDAAG TVPTVVPYPA ACRPQAWSAA GAVAVLQSVL GIEADVPAGV VRVRARPGPL GALAWGGLRA GNGVLDVARA ADGRVTARAE GDGVEVRVE
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