| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1955 |
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| Symbol | |
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| ID | 7858348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2227357 |
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| End bp | 2228616 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643866045 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002881972 |
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| Protein GI | 229820446 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.974693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000475348 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGAT CGGCACGGCG TGGCAGCGCC GTCGGGATCG CCCTGGCCGC CGGGGCGCTG
GCGCTCGCGG CCTGCGGCGG AGGGTCCGGG TTCGACGAGG GCACGGGTGA GGACACCGGC
GGCGACGAGG CCACGGGAGG CGCGGAGCTC GACGTCCTCA TCGGGTCCAG CGGCGACGCC
GAGACCCAGG CCGTGACCGC CGCCCTCGAG GCCTGGAGCA CGGAGACCGG GAACACGGCC
ACGCTCCAGG CCGCAGCGGA CCTGCCGCAG GAGCTCAGCC AGGGCTTCGC CGCGGGATCC
CCGCCGGACC TGTTCTACCT CTCGACCGAC AGCTTCCCCG CCTACGCCGC GAACGGCTCC
CTGGCGCCGT ACGCCGCCGG GCTGCCGAAC GCCGACGACT TCTACGTCAC GCTGCGCGAC
TCGTTCAGCT TCGACGGCGA GCTCGTCTGC GCGCCCAAGG ACTTCTCGAC GCTCGCGCTC
ATCATCAACA CGGACGCCTG GGAGGCGGCC GGGCTGACGG ACGACGACGT CCCGACCACG
TGGGACGAGC TGGCCGCGGT CGCGCAGACG CTGACCACCG ACGCCCAGGT CGGTCTGAGC
TTCGGGCCGG AGTGGCAGCG GATCGGCTCG TTCATGGCTC AGGCCGGCGG AGGCCTCGTC
GACGCCGACG GGCAGCCGAT CGCGAACAGC GCGGAGAACG TCGAGGCGCT GACGTACGTC
CAGGGGCTCC TGAGCTCGGG CTCCGCCGCC TACCCGGCCG ACATCGGCGC CGGCTGGGGC
GGCGAGGCGC TCGGCACCGG GGCCGCGGCG ATGGTCATCG AGGGCAACTG GGTGATCGGG
GCCATGACCA ACGACTTCCC GGACATCCCC TACCGGGTGG TCGAGCTCCC GGCCGGTCCG
GCCGGTCCGG GCACGCTGCA GTTCACCAAC TGCTGGGGTG TGCCGGCGGG CGGCGACAGC
GAGGCGGCCC TCTCCCTGGT CGAGTACCTG ACGTCGGGCG AGCAGCAGAT GGTGTTCGCC
GAGGCGTTCG GCGTGATGCC GTCCGTCGAG TCCGTCGCCG GCGACTGGGC AGCCCAGTTC
CCCGAGCAGG AGCCGTTCAT CGCCGGCGCC GAGTACGCGC AGGGTGTGCC ACCGATCGAG
GGCATCGTCG ACGTGCTCGC GGACTTCAAC GCGCAGCTCG AGTCGCTCGC GAGCGGCGAC
CCGACGGCGA TCCTCGACTC GGTCCAGGCC AACCTCGAGG CCATCGCCGG CACGTCCTGA
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| Protein sequence | MSRSARRGSA VGIALAAGAL ALAACGGGSG FDEGTGEDTG GDEATGGAEL DVLIGSSGDA
ETQAVTAALE AWSTETGNTA TLQAAADLPQ ELSQGFAAGS PPDLFYLSTD SFPAYAANGS
LAPYAAGLPN ADDFYVTLRD SFSFDGELVC APKDFSTLAL IINTDAWEAA GLTDDDVPTT
WDELAAVAQT LTTDAQVGLS FGPEWQRIGS FMAQAGGGLV DADGQPIANS AENVEALTYV
QGLLSSGSAA YPADIGAGWG GEALGTGAAA MVIEGNWVIG AMTNDFPDIP YRVVELPAGP
AGPGTLQFTN CWGVPAGGDS EAALSLVEYL TSGEQQMVFA EAFGVMPSVE SVAGDWAAQF
PEQEPFIAGA EYAQGVPPIE GIVDVLADFN AQLESLASGD PTAILDSVQA NLEAIAGTS
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