Gene Bcav_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1937 
Symbol 
ID7858330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2207243 
End bp2207776 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content75% 
IMG OID643866028 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase Dut 
Protein accessionYP_002881955 
Protein GI229820429 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.048308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG CTCCTGCACG CTCCGACGGC GACCGCACGG CCGACGACGG CGCCGGGCCG 
GGCAGCGACG TCGTCGACGT GCTGCTCCGC CGCCTCGACC CCGATCTGCC AGCGCCGTCC
TACGCGCACG CCGGGGACGC GGGCGCCGAC CTGCGCGCCC GCCACGACGT GGATCTCGCA
CCCGGCGAAC GTGCCCTCGT GCCCACCGGT GTGGCGATCG CCCTCCCGCC GGGCTGGGTG
GGCCTCGTCC ACCCGCGGTC CGGGCTGGCG GCCCGCTCCG GGGTGACCAC GCTCAACGCG
CCCGGCACGA TCGACGCGGG GTACCGCGGC GAGATCGGCG TGATCCTCGT CAACCACGAC
CCGTCCCGCA CCGCACAGGT GCGGCGTGGT GATCGCATCG CGCAGCTCGT CGTGCAGCGG
GTCGCGCACG CCCGCTTCGT CGAGGTCGAG GACCTCCCAG GATCGGTGCG CAGCGACGGC
GGATTCGGTT CCACGGGTGG GTTCGCCGCC GCGGAGACCG GAGGCCGCTC ATGA
 
Protein sequence
MTDAPARSDG DRTADDGAGP GSDVVDVLLR RLDPDLPAPS YAHAGDAGAD LRARHDVDLA 
PGERALVPTG VAIALPPGWV GLVHPRSGLA ARSGVTTLNA PGTIDAGYRG EIGVILVNHD
PSRTAQVRRG DRIAQLVVQR VAHARFVEVE DLPGSVRSDG GFGSTGGFAA AETGGRS