Gene Bcav_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1908 
Symbol 
ID7858301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2173210 
End bp2175177 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content74% 
IMG OID643865999 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_002881926 
Protein GI229820400 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.182347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00089522 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGACCA CGATCACGGA TCCTCTCGTC GGCCGGACGG TCGACGGGCG GTACGAGGTC 
GTGCGCCGGA TCGCCCGAGG CGGCATGGCG ACCGTCTATC TCGCGACCGA CCGGCGTCTG
GACCGGGAGG TGGCGCTGAA GGTCATGCAC CCGCACCTCG CGGACGGGAC CGACGTCGTC
GCCCGCTTCC GCCGTGAGGC CCGCGCGGCC GCCCGGCTCA CCCACCCGGG CATCGTCGCC
GTGCTCGACC AGGGCACCGA GGGCGACCTC AGCTACCTCA CGATGGAGTA CGTGCCCGGG
CGCAACCTCC GGGCGGAGCT GCACGCCAGG GGCTCGCTGC CGCTCGGGGA GGCGCTCGAC
GTCGGGGAAG CCGTGCTCGA CGCGCTCGCG GCCGCGCACC GCGCCGGCCT GGTGCACCGC
GACGTCAAGC CGGAGAACGT GCTCGTGACG CCGGAGGGTC GCGTGAAGGT CGCGGACTTC
GGGCTCGCTC GGGCGGTGAC GGAGGCGACG GCGGCCAGCA CCGGCACGCT GCTGGGCACC
GTCGCGTACC TCTCCCCCGA GATCGTCACC TCCGGTGAGG CCGACGCGCG CGCGGACGTG
TACGCCGCCG GCATCCTGCT GTACGAGGCG ATCACCGGGA GCCAGCCGTT CACGGGGACC
TCCCCGATCC AGGTCGCCTA CCAGCACGTC CACGAGGACG TCCCGGCGCC GTCGGACCGG
GTGCCGTGGC TGCCGATCGA GGTTGACGAC CTGCTCGCCG CGCTCACCGC CCGCGACGCC
GACGAACGCC CCGTCGACGC CGGCGCCGCC GTGGTCGAGC TCCGCCGGAC CCGGGCCGCC
ATGGACGACC GGGCGCTCGC CCTGCGCGCC GACGTCCCCG GGGCGGGCGA GGAGATCGGC
GTCGAGGACG ACCCGGACGA GAGCGACGAC GCCGTCGACG ACGCGTTCGA CGGCATCCCG
CACTCCCCGA CCACCCGGCT CGACGACGGC CCGGGCACGG GCACGATCGC GTTGCCCATC
GGTGCCGTGT CCCCGCCCGC CGCGGAGGCT CCGCCGGCGC CGCGACGCCG TCGGTCGCCG
CGGCGCCGGA TCATCGCGTG GGTGCTCGCG CTGCTGCTGG TGACCGTGGC CGGGGCCGGC
GGCTGGTACG TGACGCTCGG GCCGGGCGCG CCGGTCCTCG TCCCGGATCT CGCCGGCGAG
GAGGCCGACG ACGCCGCCGC CGCCCTGACG GAGCTCGACC TCGAGGTCTC CCGGTCCGAG
GAGCACCACG ACTCGATCCC GGCCGGCCAG GTGGTGGGGA CCGACCCGTC CTCCGGCAGC
CGTCTCGCCC GGGGCGCCGC CATCGACCTG GTCGTCTCCC TCGGGATCCG CATGGTCGAG
GTCCCGGAGC TCGTGGGCGT CCCCGAGGAC GAGGTGCTGG CCGCCCTCGC GTCCGTCGGG
CTGACCGCGG CAGAACCCGA CCGCGACCAC GACCGGAACG TCCCGGAGGG CGCCGTCGTC
AGCGCCAACG TCGAGGCGGG CGACTCCGTC CCGCACGACA CGGTGGTCGA GCTCACGGTC
TCCGAGGGGC CCGAGCCGGT CACCGTGACG GAGCTGCTCG GGGCGCACGT GGACGACGCC
GTCGAGGAGC TCACACGGGT GCTCGACATC ACCCGCGAGG AGATCACTGT CACCGAGGAG
TTCAGCGACG ACGTCGCGGC TCAGCACGTG ATCTCGCAGA GCGTCGTCGG TCCCTCCGTC
CAGGGCACGC CGGTCACGAT CGTCGTCTCG AAGGGACCCG AGCTGTTCGA GGTGCCCGAC
GTCGTCGGCG AACAGTTCGT CGATGCCGAG GCGCTGCTCA CCGGCCTGGG GTTCGAGGTG
GCCAGGGAGG ACGTGTTCGG CGGACTGTTC GGCACGGTGC GGCTGCAGAG CGTCGAGGCC
GGGTCGATGC AGCCTCGCGG CACGGTCATC ACGCTCACCG TCGTCTAG
 
Protein sequence
MATTITDPLV GRTVDGRYEV VRRIARGGMA TVYLATDRRL DREVALKVMH PHLADGTDVV 
ARFRREARAA ARLTHPGIVA VLDQGTEGDL SYLTMEYVPG RNLRAELHAR GSLPLGEALD
VGEAVLDALA AAHRAGLVHR DVKPENVLVT PEGRVKVADF GLARAVTEAT AASTGTLLGT
VAYLSPEIVT SGEADARADV YAAGILLYEA ITGSQPFTGT SPIQVAYQHV HEDVPAPSDR
VPWLPIEVDD LLAALTARDA DERPVDAGAA VVELRRTRAA MDDRALALRA DVPGAGEEIG
VEDDPDESDD AVDDAFDGIP HSPTTRLDDG PGTGTIALPI GAVSPPAAEA PPAPRRRRSP
RRRIIAWVLA LLLVTVAGAG GWYVTLGPGA PVLVPDLAGE EADDAAAALT ELDLEVSRSE
EHHDSIPAGQ VVGTDPSSGS RLARGAAIDL VVSLGIRMVE VPELVGVPED EVLAALASVG
LTAAEPDRDH DRNVPEGAVV SANVEAGDSV PHDTVVELTV SEGPEPVTVT ELLGAHVDDA
VEELTRVLDI TREEITVTEE FSDDVAAQHV ISQSVVGPSV QGTPVTIVVS KGPELFEVPD
VVGEQFVDAE ALLTGLGFEV AREDVFGGLF GTVRLQSVEA GSMQPRGTVI TLTVV