Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1901 |
Symbol | |
ID | 7858294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2165542 |
End bp | 2167362 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865992 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002881919 |
Protein GI | 229820393 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.122495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000327223 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTCGT CCGCCTCCCC CCTCGCCGTC GAGATCGACC CCCGGACGAG CATCAGCGAC CTCCTCGTCG AGCACGCCCG TGCGACGCCG TCGCGCGTGC TGCTCGAGCA GCAGGTCGAC GGGCAGTGGC GCCCGTACAC GGCCGCCGAG GTCGAGGCGC TGGTCGTCGG CGTCGCCAAG GGCCTGGTCG CGCACGGCAT CCGCCCCGGC GAGCGCGTGG CGATCATGTC CCGGACCCGG TTCGAGTGGA CGATCCTCGA CTTCGCCATC TGGCACGCCG GCGCCGTCCC CGTCCCGGTG TACGAGACGT CGTCCGTGGC ACAGACGGCG TGGATCCTGT CCGACTCCGG CGCGGTGGCG GTCATCGTCG AGTCGAGCGC CCACGGTCAG GTCGTGGCCG AGGCGCAGGC TGAGGCACCG GACGTCCGTA CCGTGTGGAC GATCGACGAC GGCGCGCTGG AGGACCTGAC CCGCGACGGT GCCGACGTCG ACGACGCCGA GATCGCCGCC CGCCACGACG CCGTCGGCAT GGAGGACCTC GCGACCATCA TCTACACGTC GGGGACCACC GGTCGCCCGC GCGGCGCCGA GCTGACGCAC GGCAACTTCG TGGCGCTGAC CAAGAACGCC ATCGCCGTCA TCCCCGACGT GTTCGCGGCG CCGGGGGCAC GGACGCTGCT GTTCATGCCG CTCGCGCACG TCTTCGCGCG CTTCGTCGAG GTCCTGGTCG TCGCGGCCGG CGTCCCGCTG GGGCACACGC CGGACACGAC GACGCTCGTC GCGGACCTCG GCACGTTCCG GCCGACGTTC ATCCTCTCGG TCCCCCGGGT GTTCGAGAAG GTCTACAACT CCGCCGAGGC GAAGGCGGCA GCCGGCGGCA AGGAGAAGAT CTTCGCCTGG GCGGCGCGCA CCGCGATCGC GTACTCCCGG TCGCTCGACA CGGGCGGGCC GTCCTACGGG CTGCGGCTGA AGCACCGGAT CGCCCACAAG CTCGTGCTGC ACAAGCTGCA GGACGCCATG GGCGGCAAGC TCGAGCACGC CGTCTCGGGC GGCGGTCCCC TCGGTGAGCG CCTCGGGCAC TTCTTCCGCG GCATCGGTCT CGTCGTCCTC GAGGGCTACG GCCTGACGGA GACGACGGCG CCGCTCAACG TCAACCGTCC GGAGCGCGTG AAGATCGGCA CGGTCGGTCC GCCGCTGCCG GGCATCGGGA TCCGGATCGC TCCGGACGGC GAGATCCTCG CCCAGGGCAT CGCCGTCTTC CGCGGGTACC ACGACAACGA CGCCGCCACC GCCGAGGCGA TGAAGGACGG CTGGTTCCAC ACGGGCGACA TCGGCGAGCT CGACAGTGAC GGCTACCTGA GGATCACCGG GCGCAAGAAG GAGATCATCG TGACGGCGGG CGGCAAGAAC GTCGCGCCCG CTCCGCTCGA GGACGCGATC CGCGCCCATC CGCTCGTCAG CCAGTGCCTC GTGGTCGGCG ACGGCCGGCC GTTCGTCGCG GCGCTCATCA CGCTCGACCC CGAGATGCTG CCGACCTGGC TGTCCTCCCG CGGCAAGCCC GAGCTGACCG TCGCTCAGGC ACGGACGGAC GAGGACGTGC TGGCCGCGAT CGACGAGGCG GTCAACCGGG CGAACACCCA CGTCTCGCGC GCGGAGTCCA TCCGCAAGGT GGTGGTGCTC GAGGACGACT TCACGATCGC CAACGACTAC CTGACCCCGT CGCTGAAGGT GAAGCGCTCC GCCGTCGTCC GCGACCGCGC CGCGGTCATC GACGAGCTGT ATGCCGCGGC GGCGACCGAA CGGGACCGCC GGCCCGCCTG A
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Protein sequence | MDSSASPLAV EIDPRTSISD LLVEHARATP SRVLLEQQVD GQWRPYTAAE VEALVVGVAK GLVAHGIRPG ERVAIMSRTR FEWTILDFAI WHAGAVPVPV YETSSVAQTA WILSDSGAVA VIVESSAHGQ VVAEAQAEAP DVRTVWTIDD GALEDLTRDG ADVDDAEIAA RHDAVGMEDL ATIIYTSGTT GRPRGAELTH GNFVALTKNA IAVIPDVFAA PGARTLLFMP LAHVFARFVE VLVVAAGVPL GHTPDTTTLV ADLGTFRPTF ILSVPRVFEK VYNSAEAKAA AGGKEKIFAW AARTAIAYSR SLDTGGPSYG LRLKHRIAHK LVLHKLQDAM GGKLEHAVSG GGPLGERLGH FFRGIGLVVL EGYGLTETTA PLNVNRPERV KIGTVGPPLP GIGIRIAPDG EILAQGIAVF RGYHDNDAAT AEAMKDGWFH TGDIGELDSD GYLRITGRKK EIIVTAGGKN VAPAPLEDAI RAHPLVSQCL VVGDGRPFVA ALITLDPEML PTWLSSRGKP ELTVAQARTD EDVLAAIDEA VNRANTHVSR AESIRKVVVL EDDFTIANDY LTPSLKVKRS AVVRDRAAVI DELYAAAATE RDRRPA
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