Gene Bcav_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1901 
Symbol 
ID7858294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2165542 
End bp2167362 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content71% 
IMG OID643865992 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002881919 
Protein GI229820393 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.122495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000327223 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTCGT CCGCCTCCCC CCTCGCCGTC GAGATCGACC CCCGGACGAG CATCAGCGAC 
CTCCTCGTCG AGCACGCCCG TGCGACGCCG TCGCGCGTGC TGCTCGAGCA GCAGGTCGAC
GGGCAGTGGC GCCCGTACAC GGCCGCCGAG GTCGAGGCGC TGGTCGTCGG CGTCGCCAAG
GGCCTGGTCG CGCACGGCAT CCGCCCCGGC GAGCGCGTGG CGATCATGTC CCGGACCCGG
TTCGAGTGGA CGATCCTCGA CTTCGCCATC TGGCACGCCG GCGCCGTCCC CGTCCCGGTG
TACGAGACGT CGTCCGTGGC ACAGACGGCG TGGATCCTGT CCGACTCCGG CGCGGTGGCG
GTCATCGTCG AGTCGAGCGC CCACGGTCAG GTCGTGGCCG AGGCGCAGGC TGAGGCACCG
GACGTCCGTA CCGTGTGGAC GATCGACGAC GGCGCGCTGG AGGACCTGAC CCGCGACGGT
GCCGACGTCG ACGACGCCGA GATCGCCGCC CGCCACGACG CCGTCGGCAT GGAGGACCTC
GCGACCATCA TCTACACGTC GGGGACCACC GGTCGCCCGC GCGGCGCCGA GCTGACGCAC
GGCAACTTCG TGGCGCTGAC CAAGAACGCC ATCGCCGTCA TCCCCGACGT GTTCGCGGCG
CCGGGGGCAC GGACGCTGCT GTTCATGCCG CTCGCGCACG TCTTCGCGCG CTTCGTCGAG
GTCCTGGTCG TCGCGGCCGG CGTCCCGCTG GGGCACACGC CGGACACGAC GACGCTCGTC
GCGGACCTCG GCACGTTCCG GCCGACGTTC ATCCTCTCGG TCCCCCGGGT GTTCGAGAAG
GTCTACAACT CCGCCGAGGC GAAGGCGGCA GCCGGCGGCA AGGAGAAGAT CTTCGCCTGG
GCGGCGCGCA CCGCGATCGC GTACTCCCGG TCGCTCGACA CGGGCGGGCC GTCCTACGGG
CTGCGGCTGA AGCACCGGAT CGCCCACAAG CTCGTGCTGC ACAAGCTGCA GGACGCCATG
GGCGGCAAGC TCGAGCACGC CGTCTCGGGC GGCGGTCCCC TCGGTGAGCG CCTCGGGCAC
TTCTTCCGCG GCATCGGTCT CGTCGTCCTC GAGGGCTACG GCCTGACGGA GACGACGGCG
CCGCTCAACG TCAACCGTCC GGAGCGCGTG AAGATCGGCA CGGTCGGTCC GCCGCTGCCG
GGCATCGGGA TCCGGATCGC TCCGGACGGC GAGATCCTCG CCCAGGGCAT CGCCGTCTTC
CGCGGGTACC ACGACAACGA CGCCGCCACC GCCGAGGCGA TGAAGGACGG CTGGTTCCAC
ACGGGCGACA TCGGCGAGCT CGACAGTGAC GGCTACCTGA GGATCACCGG GCGCAAGAAG
GAGATCATCG TGACGGCGGG CGGCAAGAAC GTCGCGCCCG CTCCGCTCGA GGACGCGATC
CGCGCCCATC CGCTCGTCAG CCAGTGCCTC GTGGTCGGCG ACGGCCGGCC GTTCGTCGCG
GCGCTCATCA CGCTCGACCC CGAGATGCTG CCGACCTGGC TGTCCTCCCG CGGCAAGCCC
GAGCTGACCG TCGCTCAGGC ACGGACGGAC GAGGACGTGC TGGCCGCGAT CGACGAGGCG
GTCAACCGGG CGAACACCCA CGTCTCGCGC GCGGAGTCCA TCCGCAAGGT GGTGGTGCTC
GAGGACGACT TCACGATCGC CAACGACTAC CTGACCCCGT CGCTGAAGGT GAAGCGCTCC
GCCGTCGTCC GCGACCGCGC CGCGGTCATC GACGAGCTGT ATGCCGCGGC GGCGACCGAA
CGGGACCGCC GGCCCGCCTG A
 
Protein sequence
MDSSASPLAV EIDPRTSISD LLVEHARATP SRVLLEQQVD GQWRPYTAAE VEALVVGVAK 
GLVAHGIRPG ERVAIMSRTR FEWTILDFAI WHAGAVPVPV YETSSVAQTA WILSDSGAVA
VIVESSAHGQ VVAEAQAEAP DVRTVWTIDD GALEDLTRDG ADVDDAEIAA RHDAVGMEDL
ATIIYTSGTT GRPRGAELTH GNFVALTKNA IAVIPDVFAA PGARTLLFMP LAHVFARFVE
VLVVAAGVPL GHTPDTTTLV ADLGTFRPTF ILSVPRVFEK VYNSAEAKAA AGGKEKIFAW
AARTAIAYSR SLDTGGPSYG LRLKHRIAHK LVLHKLQDAM GGKLEHAVSG GGPLGERLGH
FFRGIGLVVL EGYGLTETTA PLNVNRPERV KIGTVGPPLP GIGIRIAPDG EILAQGIAVF
RGYHDNDAAT AEAMKDGWFH TGDIGELDSD GYLRITGRKK EIIVTAGGKN VAPAPLEDAI
RAHPLVSQCL VVGDGRPFVA ALITLDPEML PTWLSSRGKP ELTVAQARTD EDVLAAIDEA
VNRANTHVSR AESIRKVVVL EDDFTIANDY LTPSLKVKRS AVVRDRAAVI DELYAAAATE
RDRRPA