Gene Bcav_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1893 
Symbol 
ID7858286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2157031 
End bp2157486 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content76% 
IMG OID643865984 
Productresponse regulator receiver protein 
Protein accessionYP_002881911 
Protein GI229820385 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.127088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000556231 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTCG AGCACGCCCA GCCCACCGGC TCCGCCCCGG AGGTCGCCAG CACCCTCGAG 
GAGCCGGCCC AGGTCCTCCT CTACAGCGAC GACCGCGCCA CGCGGGACGC GGTGCGGCTC
GCCGTCGGAC GCCGGGCGTC GGTGGACACC GCGCGCATCG CGTGGACCGA GTCCGCGACC
GCGGAGGCGA CGCTGGCGTA CGCGGCGGCG CAGCGCTTCG ACCTGCTCGT GCTCGACGGC
GAGGCGGCGA AGGTCGGCGG CATGGGGATC AGCCGGCAGC TCAAGAACGA GATCTACGAC
TGCCCGCCCG TGCTCGTGCT CACGGCGCGC CCGCAGGACG CGTGGCTCGC GGCGTGGTCG
GAGGCCGACG GCGTCGTGTC CCACCCGCTG CGCCCCGTCG AGGTCGCCGA GGCCGTGGCC
GCGCTGCTCC GGGCGGGCGA GCGGTCGACG CCGTGA
 
Protein sequence
MTLEHAQPTG SAPEVASTLE EPAQVLLYSD DRATRDAVRL AVGRRASVDT ARIAWTESAT 
AEATLAYAAA QRFDLLVLDG EAAKVGGMGI SRQLKNEIYD CPPVLVLTAR PQDAWLAAWS
EADGVVSHPL RPVEVAEAVA ALLRAGERST P