Gene Bcav_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1776 
Symbol 
ID7861284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2035406 
End bp2036794 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content69% 
IMG OID643865864 
Productglycyl-tRNA synthetase 
Protein accessionYP_002881794 
Protein GI229820268 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0423] Glycyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00389] glycyl-tRNA synthetase, dimeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0539153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCT CGTCCAGCCG TCTCGACGCC GTCGTCAGCC TCGCCAAGCG CCGAGGATTC 
GTCTTCCAGG CCGGCGAGAT CTACGGGGGT TCCCGCTCCG CGTGGGACTA CGGACCGCTC
GGCGTCGAGC TCAAGGAGAA CATCAAGCGG CAGTGGTGGC GCGCGATGGT CACGAGCCGC
GACGACATCG TCGGGCTCGA CTCCTCGGTC ATCCTCCCGC GCCCCGTCTG GGTGGCGTCC
GGGCACGTGG GCGCGTTCTC GGACCCGCTC ACCGAGTGCC TCTCCTGCCA CAAGCGCTTC
CGCGAGGACC ACCTCATCGA GGAGTTCGAA GAGCGGAAGG GACGCGCTCC CGAGGGCGGG
CTCGCCGAGA TCGCGTGCCC GAACTGCGGC ACCCGCGGGC AGTGGACCGA GCCCCGTGAC
TTCAACATGA TGCTCAAGAC GTACCTCGGC CCGGTCGAGG ACGAGTCGGG GCTGCACTAC
CTGCGGCCGG AGACGGCCCA GGGCATCTTC GTGAACTTCG CGAACGTGAT GGGCGCCGCG
CGCAAGAAGC CGCCGTTCGG CATCGCGCAG ATCGGCAAGT CGTTCCGGAA CGAGATCACG
CCGGGGAACT TCATCTTCCG CACGCGCGAG TTCGAGCAGA TGGAGATGGA GTACTTCGTC
GAGCCCGGCA GCGACGAGCA GTGGCACCAG TACTGGATCG ACGCGCGCAC CGACTGGTAC
GTCGACCTCG GCATCGACCG GGACAACCTG CGGCTCTACG AGCACCCCGC CGAGAAGCTC
TCGCACTACT CCACCCGCAC GGTCGACATC GAGTACCGCT TCGGGTTCAC CGGCAGCGAG
TGGGGCGAGC TCGAGGGGAT CGCGAACCGC ACCGACTTCG ACCTCAAGAC CCACTCCGAG
CACTCCGGAC GTGACCTGTC CTACTTCGAC CAGGGCAAGA ACGAGCGGTG GGTGCCGTAC
GTCATCGAGC CGGCGGCCGG CCTGACCCGC TCCCTCATGG CGTTCCTCGT GGAGGCGTAC
GCCGAGGACG AGGCACCGAA CACCAAGGGC GGCGTCGACG TGCGCACCGT CCTGCGCCTC
GACCACCGGC TCGCCCCCGT CAAGGTCGCG GTGCTGCCGC TCAGCCGCAG CGGCGACCTG
TCGCCGAAGG CCCGCGGGCT CGCGGCCGAG CTGCGTCAGG CGTGGAACGT CGACTTCGAC
GACGCCGGGG CGATCGGTCG GCGCTACCGG CGGCAGGACG AGATCGGCAC GCCGTTCTGC
GTGACCGTCG ACTTCGACAC GCTCACCGAC GACGCCGTCA CCGTCCGGCA CCGTGACTCG
ATGCAGCAGG AGCGGGTGGC GCTGTCGAAG GTCCGCGGCT ACCTCGCGGA GCACCTCGTC
GGCGCCTGA
 
Protein sequence
MASSSSRLDA VVSLAKRRGF VFQAGEIYGG SRSAWDYGPL GVELKENIKR QWWRAMVTSR 
DDIVGLDSSV ILPRPVWVAS GHVGAFSDPL TECLSCHKRF REDHLIEEFE ERKGRAPEGG
LAEIACPNCG TRGQWTEPRD FNMMLKTYLG PVEDESGLHY LRPETAQGIF VNFANVMGAA
RKKPPFGIAQ IGKSFRNEIT PGNFIFRTRE FEQMEMEYFV EPGSDEQWHQ YWIDARTDWY
VDLGIDRDNL RLYEHPAEKL SHYSTRTVDI EYRFGFTGSE WGELEGIANR TDFDLKTHSE
HSGRDLSYFD QGKNERWVPY VIEPAAGLTR SLMAFLVEAY AEDEAPNTKG GVDVRTVLRL
DHRLAPVKVA VLPLSRSGDL SPKARGLAAE LRQAWNVDFD DAGAIGRRYR RQDEIGTPFC
VTVDFDTLTD DAVTVRHRDS MQQERVALSK VRGYLAEHLV GA