Gene Bcav_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1678 
Symbol 
ID7859620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1924886 
End bp1925998 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content74% 
IMG OID643865766 
ProductOpine dehydrogenase 
Protein accessionYP_002881696 
Protein GI229820170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.906291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TCCCGTCCTC CGTCACCGTC CTGGGCTCCG GCGCCGGGGC GCTGTCCAGC 
GCCACCGAGC TCTCCCTCGC CGGCGTCGAC GTCACGGTCG CCGACTTCGA GCGGTTCCGC
GCGAGCATCG ACGCCATCGC GGCCAGCGGC GTCATCCGCC TCCGGTCGCC GTGGCACGGG
ATCACCGAGA CGCCGGCCCG CGCGAGCCTC GACCCCGCCG CCGCGGCCGC CGCGGCCGAC
GTCGTCGTCG TCTCCGTGCC GGCGTTCGGT CACGACACGT TCGCGACCCT GCTCGCGGAG
CACGTCCGCC CGGGCTCCCA GGTGATCTTC GCGGGCGAGG GCGGCGGCAG CCTCGCGCTC
GTCGCCGCGA TGCAGCGCGC CGGCCGCACG CTCGATGTCG ACGTCGCCGA GCTCAACAGC
CTCCCGTACG GCGCGCGGGT GCGCGCGCCC GGCCTCATCA CTGCCTCGCG CAAGGTCGGC
GGCACGATCG CCGCCGGCAT GCCGGCGGGG AACGCCGCCG TCGCGACGGC GTGCGCGATC
TGGCCGTCCG TGAGCGCCGG TGAGAGCGTG CTCGAGACGG TGCTGCTGAA CTTCAACGCG
ATCGACCACG TCCCGCCGAT CCTGGCGAAC CTCGGCGCGA TCGAGGGCCG CCCCGGCAAG
TTCCTGCTGT GGGGCGAGGG CGCGAGCCCG GCCGTGGCCC GGTTCATCGG GGCGATCGAC
GCCGAGCTGG TCGCGATCCG CCGCGAGCTG GGCTTCGCGA ACCTCAAGGG GTACGAGGAG
TACCTCGTCG AGCAGGGTTT CGCGCCGGAG GTGCTCGGCG ACCTGCACGC CACCCTGGCC
TCGTCGGCCT TCGCCGACTC GACGTTCGGC ACCGGGCCTC GGGCGCTCGA GAGCCGGTAC
ATCACCGAGG ACGTGCCGTA CGCGCTCTGC CTCATGGCGT CGATCGGTCT CGAGGTGGGC
GTCGCGACGC CGACGATCGA CTCGATGATC CACCTGGCCG GCGTGGCGAC CGGCACGGAC
TACCGGGCCG CGGGCCGCAC CCTCGACGTG TTCGGCCTCG CGGGCCTCGG CCGCGACGGG
CTCCTCGAGG CGACGAGGAC CGGGCGATGG TGA
 
Protein sequence
MSTLPSSVTV LGSGAGALSS ATELSLAGVD VTVADFERFR ASIDAIAASG VIRLRSPWHG 
ITETPARASL DPAAAAAAAD VVVVSVPAFG HDTFATLLAE HVRPGSQVIF AGEGGGSLAL
VAAMQRAGRT LDVDVAELNS LPYGARVRAP GLITASRKVG GTIAAGMPAG NAAVATACAI
WPSVSAGESV LETVLLNFNA IDHVPPILAN LGAIEGRPGK FLLWGEGASP AVARFIGAID
AELVAIRREL GFANLKGYEE YLVEQGFAPE VLGDLHATLA SSAFADSTFG TGPRALESRY
ITEDVPYALC LMASIGLEVG VATPTIDSMI HLAGVATGTD YRAAGRTLDV FGLAGLGRDG
LLEATRTGRW