| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1615 |
|---|
| Symbol | |
|---|
| ID | 7858811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1857618 |
|---|
| End bp | 1859273 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643865702 |
|---|
| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
|---|
| Protein accession | YP_002881633 |
|---|
| Protein GI | 229820107 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.711666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCCC TGGACCCCCG CCTGCTGCGC GAGGCCCGCT CGGTCCGCGG CTGGGTCCTC
GCGAGCGCCG CGTTCGCGAT CGGGGTGACG GCGTGCGTCG TCGTCAGCGC GTTCGCGATC
GCGCAGGCGC TCGCCCCCGT GGTCTCGGGC ACCGCGACAC TCGCCGACGT CCGCACGCCG
CTCGTCGTCC TCGCCGTCGC CGTGGTGGCT CGCGCCGTCT TGGCGTGGGC CGCTGAGCGG
ACGGCGCACG CGAGCGCCGC CCAGGTGATC GGCGAGCTGC GGGGGCGGCT GCTCGACCAC
GCCACACGGC TGCCCCACCG GTGGCGCACG GAGCACGGAG CCGGCGTCGT CGTGCTCGCG
ACCCGCGGCC TCGACGACCT CGAGCCGTAC CTCGTCCGGT ACCTGCCCCA GCTGCTGCTC
GCCGCGACGC TCACGCCCGC GACGCTCGCC GTCGTCCTCA CGCAGGACCT CCTCTCCGGA
CTGCTCCTCG CGTTCACGCT GCCGCTCGTC CCGCTGTTCA TGTGGCTCGT GGGGGTCACC
ACCGCGACGT TCGCCCGCGG CCGCCTCGCG GTGCTCGAGC GGCAGGGAGC CCAGCTGCTG
GACCTCCTGG CGGGGCTCAC CACGCTGCGG GCTCTGGGCC GGGAGGTCGG ACCGGGCACC
CGGGTGCGCC GGCTCGGCGA GGCCTACCGC CGGACCACGA TGTCCACGCT GCGGGTCGCG
TTCCTGTCGG GCGGCGTGCT CGAGCTGCTC GCCACGCTCG GTGTCGCGCT CGTCGCCGTC
GGGATCGGTC TGCGCCTGGT CGAGGGCGAC CTCACGCTCG TCACCGGACT GACGGTGCTC
GTCCTCGCCC CGGAGGTCTA CCTCCCGCTG CGGATGGTCG GCACCCACTT CCACGCCTCG
GCCGACGGCG TCGCGGCGGC CGAGCGCACG TTCGCCGTCC TCGACGAACC GCTGCCGGCG
AGCGGCACGC TCCCGGTGCC GGACTGGTCC CGGATCGAGG TGCGCGGCCT CGGCGTGCGG
GCGGGTGAGC GCGGCTACTG GGCGCCACGA TCCGTGGACG CCGTGATCCG GCCGGGCGAG
ATCCTCGCGC TCGCGGGGCC GAGCGGATCC GGCAAGACCA CGACGGCGAT GGCGATGCTG
GGGCTGCAGC CCGCCGACGC GGGCGGGGTC CGGCTCGTGG ACGACTCGAC GCCGACGGGC
GAGGCGGGGA CGCCGCTGGA GGACGTCGAC CCCGCGGCGT GGTGGGCGCA GGTCGCGTGG
GTGCCGCAGC GTCCGTCGTT CGGCCCCGGG AGCGTCGCCG AACGGGCGGG AGGCACGTCG
GACCACGTCG TGCAGGCGGC CGCGGCGACC GGCCTCGACC GCGTCGTCGC CCGCCGCGGG
GGCTGGACGA CGGCGCTCGG GCAGGGCGGG ACCGGGCTCA CCGTCGGCGT GTCGGTGGGC
GAGTCCCAGC GCCTCGCGCT CACGGCGGCG CTCGCCCGCG GCGCCCGGCT CGTCGTCGTC
GACGAGCCGA CCGCCCACCT GGACCCGCTG GCCGAGGCCG AGGTGCTCGC CGCCCTCCGC
GGCGCCGCCG ACGCCGGCGC CGCCGTCGTC GTCATCGCCC ATCGTCCGAC GACGCTCGCC
GCCGCCGACC ATGTGGTCAG GGTCGACGGT GGGTGA
|
|---|
| Protein sequence | MKPLDPRLLR EARSVRGWVL ASAAFAIGVT ACVVVSAFAI AQALAPVVSG TATLADVRTP
LVVLAVAVVA RAVLAWAAER TAHASAAQVI GELRGRLLDH ATRLPHRWRT EHGAGVVVLA
TRGLDDLEPY LVRYLPQLLL AATLTPATLA VVLTQDLLSG LLLAFTLPLV PLFMWLVGVT
TATFARGRLA VLERQGAQLL DLLAGLTTLR ALGREVGPGT RVRRLGEAYR RTTMSTLRVA
FLSGGVLELL ATLGVALVAV GIGLRLVEGD LTLVTGLTVL VLAPEVYLPL RMVGTHFHAS
ADGVAAAERT FAVLDEPLPA SGTLPVPDWS RIEVRGLGVR AGERGYWAPR SVDAVIRPGE
ILALAGPSGS GKTTTAMAML GLQPADAGGV RLVDDSTPTG EAGTPLEDVD PAAWWAQVAW
VPQRPSFGPG SVAERAGGTS DHVVQAAAAT GLDRVVARRG GWTTALGQGG TGLTVGVSVG
ESQRLALTAA LARGARLVVV DEPTAHLDPL AEAEVLAALR GAADAGAAVV VIAHRPTTLA
AADHVVRVDG G
|
|---|
| |