Gene Bcav_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1585 
Symbol 
ID7859743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1826794 
End bp1827759 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content74% 
IMG OID643865672 
ProductABC transporter related 
Protein accessionYP_002881603 
Protein GI229820077 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.719287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG ATGCGCTGAT CTCCGCCACC GGGGCGATCC GCCGGTACGG GACGTTCGAG 
GCCGTCCGCG GTGTCGACCT GACCGTCCGC CGCGGGGAGC TCCTCGCCCT GCTCGGCACG
AACGGTGCCG GCAAGACGTC GCTGCTCGAG CTGATCGAGG GTCTCGCCCC CGCGAGCGGC
GGCACGGTCC GCGTGCTCGG CCACGACCCG TACCGCGAAC GCGGCCACGT GATCCCGCGT
GTCGGGATCA TGCTGCAGGA GGCCGGGTTC GCGTCCGACC TGACCGTCGC CGAGACGGCG
CGCATGTGGG CGGGCACCCA GACCGCGCCG CGGCCGTACC GTGCCGCCCT CGACATCGTC
GGGCTCGCGC ACCGCGCGGA CGTCCGGGTG GCCAGCCTCT CCGGCGGGGA GCGGCGCCGC
CTCGATCTCG CGCTGGCCGT CATGGGCCGG CCCGAGGTGC TCTTCCTGGA CGAGCCCACC
ACCGGGCTCG ACCCGGCCAG TCGGCGCGCG ACCTGGGACC TCGTGCGCGA CCTGCTCGCC
GACGGCACCA CTGTCCTCCT CACCACCCAC TACCTGGAGG AGGCCGAGGA GCTCGCCGAC
CGGATCGCCG TCATGCACGA GGGGCGGATC GCCCGCGAGG GCACCGTCGC CCAGATCGTC
GCCACCGAGC CGGCCCGGGT CTCGTTCGTG GTGCACGACG GCGCCGGCCG CGTCGTCGAC
GTGCGTGCGG CCGATCTCCC GCCGCTCGCG GGCGCCGTCG CCCCGCCGGA CGTCGCGCGA
GCGCGAGTCA GCGTGCGCAC CGACGAGCTG CAGGACGACC TCGGCACGAT CCTCGGCTGG
GCCCACGAGC GGAGCTACCG CCTGGCGGAG CTCGACGCAC GAGCGGCCTC GCTGGAACAG
GCGTTCCTGG CGATCGCCGG GACGCCGTCG TCCGCGGCAC CTATCGAGAA GGAGGCAGCA
GCATGA
 
Protein sequence
MTTDALISAT GAIRRYGTFE AVRGVDLTVR RGELLALLGT NGAGKTSLLE LIEGLAPASG 
GTVRVLGHDP YRERGHVIPR VGIMLQEAGF ASDLTVAETA RMWAGTQTAP RPYRAALDIV
GLAHRADVRV ASLSGGERRR LDLALAVMGR PEVLFLDEPT TGLDPASRRA TWDLVRDLLA
DGTTVLLTTH YLEEAEELAD RIAVMHEGRI AREGTVAQIV ATEPARVSFV VHDGAGRVVD
VRAADLPPLA GAVAPPDVAR ARVSVRTDEL QDDLGTILGW AHERSYRLAE LDARAASLEQ
AFLAIAGTPS SAAPIEKEAA A