| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1571 |
|---|
| Symbol | |
|---|
| ID | 7859729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1804796 |
|---|
| End bp | 1808128 |
|---|
| Gene Length | 3333 bp |
|---|
| Protein Length | 1110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643865658 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_002881589 |
|---|
| Protein GI | 229820063 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG TCGACGACGC CGCCCGCTCG CGGATCGCCA CCGACACGTC GTCCTCGCTG
TTCGTCGAGG CCGGCGCCGG CTCCGGCAAG ACCCGCTCGC TCGTGGAGCG CGTGGGCACG
CTCGTGATGG ACGACGGCGT CCCGCTGGCC CAGATCGCGG CCATCACGTT CACGGAGAAG
GCCGGCGCGG AGCTGCGCGA CCGGCTCCGG GGGGAGTTCG AGCGCGTGTG GCGGCGGGCG
CGGCCGGGCG GACCGCAGGA GGATCCCGCC CGCTCGTCCC TGGCCGAACG GGCGCTCGAG
GACCTCGACG GCGCCGCGAT CGGCACGCTC CACTCGTTCG CGCAGCGGAT CCTCGCCCGG
CACCCGGTCG AGGCGGGTCT GCCGCCCCTG ATCGAGGTGA GCGACGAGGT CGCGTCCGGT
GTCGCGTTCG ACGAGCGGTG GTCGGTGCTC CAGCGCGAGC TGCTCGACGA CGAGGAGATG
GCGCCCCGCC TGCTGCTCGC GATGGCGGCG GGCGTGACGT TCGACCACCT GCGCTCGCTC
GCGCGCGCGT TCGGCGCGGA CTGGGACCTC ATCGAGGGCC ACGTCCTGCG CGGCGCGAGC
AACGACAGCG CCCTCCCGGA CGCCGCGCCG CTCGTGGACG AGGCGCAGGC GCTCGCCGCG
CGTGCCGCGG AGTGCACGGA CCCGGACGAC AAGCTGCTCA CCAGGCTCTC CGAGATCCGG
GCGTGGGCGC AGGTGCTCGC GGCCGCCGAC GGCGATCCCC GCCGCACGTA CGCGGCGCTC
GTCGCGCTGG GGGAGCCGAG GTTCGGGCGG GTCGGGCGCA AGACGAGCTG GCCGGACGTC
GACGCGGTGC GGGCCGCGTG CACCGCCCTC GTGGAGCACG TGAGCGCCGC CGCTGCCGCG
TTCGCGGATG CCGCGGTCCG TCCGCTCGCC CGGTGGATCG CCGCACGCGT GGTGCGCGAC
GCACGCGCCC GCGCCGCCGA GGGCGCCCTG GAGTTCCACG ACCTGCTCGT CCTCGCCCGC
GACCTGCTCC GGACCCGCGA GGACGTGCGC AGCTCGCTCC AGGCGGCCTA CCCACGTCTG
CTCCTCGACG AGTTCCAGGA CACCGACCCG ATCCAGGTCG AGCTGGCGGT GCGCATCGCT
GCCGGGGCCG AGGGCGGCGC CGGGGACTGG CACGACGTGC GCGTCCCGCC GGGGTCGCTC
TTCGTCGTCG GCGACCCGAA GCAGTCGATC TACCGGTTCC GGCGCGCCGA CATCCGCACG
TTCCTCGACG TGCGCACGTG GCTCGGCGAC GTGTGCTCGC TCACCACGAA CTTCCGGTCG
GCCGCGCCCG TTCTCGCCTG GGTCAACGCG ACGTTCGGGG AGCTCATCCA GCCGGTCGAC
GGCGCCCAGC CCGCCTACGA GCCGCTGGAC GCGGTGCGGC CCCCGGTGGG GGTCGGTCCG
GCGGTGACGG TGCTCGGCGC CCAGCCGCAC CAGGACCTGC CCCGCGCGAG CGCCGCGCTG
CTGCGCGAGC GCGAGGCGGC CGACGTCGCG GCGGTGCTGC TGCGCGCGGC CGGCCAGGGC
TGGACGGTCC ACGATCCGCG CGGCGGCGAG GAGCGGGAGC TGCGGTGGGG GGACGTGGCG
GTCCTCGTTC CCGCGCGGAC GTCGCTGCCG TTCCTCGTCG AGGCGCTCGA CGCCGCCGGG
ATCCCGTACC GGGCCGAGTC GAGCTCGCTC GTGTACTCCG CGACCGAGGT TCGCGCCCTC
ATGGCCGCCG CACGGGCGAT CGCCGACCCC GGCGACCAGT TCTCCGTGGT CACCGCGCTG
CGCTCGCAGG TCTACGGGTG CGGCGACGAC GACCTGTGGT CGTGGAAGCG TGACGGCGGT
TCGTTCCACC TGCTCGCGCC GGCCGACGAG GACCGAGCCG ACCACCCGGT CGCACAGGGG
CTCGCCCACC TGCGCACGGT GCACCGGTGG GCGCGCTGGG CGACGCCGAG CGAGGTCCTC
GCGCGGGTCG CCGCCGACCG CCGCATGTTC GAGGTCCCGG CCGACGCACC CGCGCACGCG
CGCGACGTCT GGCGCCGGCT CCGCTTCGTG CTGGACCAGG CCCGCGCCTG GAGCGAGGTC
TCCCACGGCG GGCTCCGGGC CTACCTGGCG TGGGCGGCGC GGCAGGCCGA CGAGTCCTCC
CGGGTGGCGG AGGCGATCCT CCCGGAGACG GACGTCGACG CGGTGCGGAT CATGACGATC
CACGCGGCGA AGGGGCTCGA GTTCCCGCTC GTCGTGCTGT CCGGGCTCAC GTCGCAGCAG
CGTCGGGCGA GCGGCGTGCG CCTCCTGTGG ACCGACGACG GGTACGCGGT GCGGCTGCGG
CAGTCCGTGC AGACGAACGA CTTCACCGCC GCGGCCCCGC TCGACGAGCA GATGGACGAC
CACGAGCGCC GCCGCCTGCT CTACGTCGGT GCGACTCGGG CGCGCGACCA TCTCGTCGTG
TCGCTGCACC GTGGGCCGAC GGCGGCCGCC ACCCACGCGA GGCTGCTGGC CGACGCGGGC
GGGAGCGGCG CGGGAGCGCA CGCGTTCACC GCGGCCGACG ACGGCGCTGC TCGCCCCGAG
CGCGCGGCGG CACCTGCCGC TCCCGACCAC GCGGCGTGGG CGGGCCGCCT CGAGGCGGCC
CGCGCGGCGT CCCGCCGGGT CGCGACGCAC AGCGCGTCGG GCCTCGAGGG GACGGAGCCC
GAGGTCGTCT TCGCGCACTC CGCGACGGGA CGCGCGAACG CGGGGGACGC CGTCGTCGAT
CCCGGAGGAG GGGAGGGCGA CGCGCTCCCG GGCAGCGCGA AGGGTCCGCG CGACCTCGCC
CTGCCACCGT GGTCGAAGGG CAGGTACGGG ACGGCGATCG GGCGGGCCGT GCACGGCGTG
CTGCAGGCCG TGGACCTCCG CGTCCAGCTC GCCGACGCCG GCGAGCTGGA CGCGGCCGTC
GAGGCACAGG CGCGCGTCGA GGGCGTTCTC GAGTTCGCGG ACGTCGTGGC CGACCTGGCC
CTGTCGGCGC TCGCGAGCCC GCTCGTGCAG GACGCGGCGC GCCGGGAGCA CTGGGCGGAG
ACGTTCGTCG CGACGCTCGA ACCGGACGGC CGGGTGCTCG AGGGCGTCGT CGACCTGCTC
GTGCGGGACG CCGACGGCGC GGTGACGATC GTCGACTACA AGACCGACGC CGTTCCGGAG
GCCGCGCTCG GCGTGCGCAC GGAGTTCTAC GCGCCGCAGC TGCGCGCGTA CGCCCGGGCC
CTGCGGGACG CGGGCGCCGA CGTGCGACGC GCGGTGCTCC TGTTCCTCGC GCCCGACGGC
GCGGTGGAAC GCGAGGTGAC GCTCGGGTTG TGA
|
|---|
| Protein sequence | MTLVDDAARS RIATDTSSSL FVEAGAGSGK TRSLVERVGT LVMDDGVPLA QIAAITFTEK
AGAELRDRLR GEFERVWRRA RPGGPQEDPA RSSLAERALE DLDGAAIGTL HSFAQRILAR
HPVEAGLPPL IEVSDEVASG VAFDERWSVL QRELLDDEEM APRLLLAMAA GVTFDHLRSL
ARAFGADWDL IEGHVLRGAS NDSALPDAAP LVDEAQALAA RAAECTDPDD KLLTRLSEIR
AWAQVLAAAD GDPRRTYAAL VALGEPRFGR VGRKTSWPDV DAVRAACTAL VEHVSAAAAA
FADAAVRPLA RWIAARVVRD ARARAAEGAL EFHDLLVLAR DLLRTREDVR SSLQAAYPRL
LLDEFQDTDP IQVELAVRIA AGAEGGAGDW HDVRVPPGSL FVVGDPKQSI YRFRRADIRT
FLDVRTWLGD VCSLTTNFRS AAPVLAWVNA TFGELIQPVD GAQPAYEPLD AVRPPVGVGP
AVTVLGAQPH QDLPRASAAL LREREAADVA AVLLRAAGQG WTVHDPRGGE ERELRWGDVA
VLVPARTSLP FLVEALDAAG IPYRAESSSL VYSATEVRAL MAAARAIADP GDQFSVVTAL
RSQVYGCGDD DLWSWKRDGG SFHLLAPADE DRADHPVAQG LAHLRTVHRW ARWATPSEVL
ARVAADRRMF EVPADAPAHA RDVWRRLRFV LDQARAWSEV SHGGLRAYLA WAARQADESS
RVAEAILPET DVDAVRIMTI HAAKGLEFPL VVLSGLTSQQ RRASGVRLLW TDDGYAVRLR
QSVQTNDFTA AAPLDEQMDD HERRRLLYVG ATRARDHLVV SLHRGPTAAA THARLLADAG
GSGAGAHAFT AADDGAARPE RAAAPAAPDH AAWAGRLEAA RAASRRVATH SASGLEGTEP
EVVFAHSATG RANAGDAVVD PGGGEGDALP GSAKGPRDLA LPPWSKGRYG TAIGRAVHGV
LQAVDLRVQL ADAGELDAAV EAQARVEGVL EFADVVADLA LSALASPLVQ DAARREHWAE
TFVATLEPDG RVLEGVVDLL VRDADGAVTI VDYKTDAVPE AALGVRTEFY APQLRAYARA
LRDAGADVRR AVLLFLAPDG AVEREVTLGL
|
|---|
| |