Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1517 |
Symbol | |
ID | 7861626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1738244 |
End bp | 1738921 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643865602 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002881535 |
Protein GI | 229820009 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.156852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG ACGTCACCCC GTTGCAGCAG GAAGCGCTCG GCGACAGGGT CGCCCGGGCA CTGCGCCGCA AGATCGTCTC CGGAGAGCTC GAGCGCGGCA CCCATCTCGT GGAAGGTCCC CTCTCGGAGA GCTTCGGCGT CAGCCGCGGC CCGATCCGCG ACGCGCTCCG GGCGCTCGAG AGCGACGGCC TCGTCGAGTC ACGCCGTCGC GGAGCGTTCG TCGTCGGGCT CGACGAGAAC GACATCGACG AGCTCTACTC GCTGCGCGAG GTGCTCGAGG CGTTCGCCCT GGACCTGGTG CTCGAGCAGG AGCGGCTCGA CCGCACGCCG TTCGTCGACG CGGTCGAGGC CATGCGGGAC GCGGCGCAGC GAGGCGACAG CGCCAGCTTC GCGGAGGCCG ACGTCATGTT CCACCGGCTC TTCTACACCG CGTCGCACCA CCGCCGCCTG CACGCGATGT GGCACACGCT CGAGCCGACC TTCGTGGCGC TGCTCGAGAT CAGCACCGCC CAGGACGACG ACCTCGGCCC GTCGGCGGAG TCGCACGCCC AGATCCTCGA CGCCGTGCTG GCCGGCGACG GCGACTCGGC ACGCACGGAG CTCGGCGCCC ACCTCCTCGG CGCCCGCTCC CGCATCACCG CCGCCCACCA GAGACGCACG GGACGCCCCG CGACCTGA
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Protein sequence | MDIDVTPLQQ EALGDRVARA LRRKIVSGEL ERGTHLVEGP LSESFGVSRG PIRDALRALE SDGLVESRRR GAFVVGLDEN DIDELYSLRE VLEAFALDLV LEQERLDRTP FVDAVEAMRD AAQRGDSASF AEADVMFHRL FYTASHHRRL HAMWHTLEPT FVALLEISTA QDDDLGPSAE SHAQILDAVL AGDGDSARTE LGAHLLGARS RITAAHQRRT GRPAT
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