Gene Bcav_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1509 
Symbol 
ID7861618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1729800 
End bp1730528 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content74% 
IMG OID643865594 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_002881527 
Protein GI229820001 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCA TCGCCGTCGG CCACCGGGGA GCCGCAGCCC TGGCCCCCGA GAACACGCTC 
GCCTCGTTCG CGCGAGCGGA GGAGATCGGG GTCAACCAGC TCGAGCTCGA CCTCCAGACC
AGCAGCGACG GGCACGTCGT CGTCATCCAC GACGCGAGCG TCGACCGGAC GACGAACGGG
ACGGGCGCCG TCGCCGACCT GACGTTCGAG CAGCTGCGGG TGCTCGACGC CGGCGACGGG
GCCACGATCC CGACGTTCGC CGAGGTGCTC GACGCGACGA GCGTCTCGCT CCAGGTGGAG
ATCAAGGCCA CGACGGCGAT CGAGCCCGCC GTCGAGCTGC TGCGGCAGCG TCCCGAGGAC
GCCCGGCGGT GCGAGCCGAC GTCGTTCGAC GCCGCGACGG TGGGTCGCTT GGCCGAGCTG
CTGCCGGACG CGTGCGTCGG GCTCATCCGC AAGGTCGCCG GACCCGACGT GCTCGACGAG
GCGGCCTCGC TCGGCGCCCG GCGGGTGCTC GTGGGCCTCG AGAGCGCCGA CGAGGCGTTC
GTGCGGGCAG CGCGGGAGCG CGGGTTCCGG GTGGACCTGT GGCCGATCCG CACCGCCGAC
GACGTACGCC GGGTCGTGGA GCTCGGCGCC GACGGGTTCA CCCTCGACGA CCCGCGGCTG
GTCGCCGACG CCGGGTTCCG GATGACGCCG GACGGGCTCG TCGGCGTCGA CGTCCCCGCC
CGGTCCTGA
 
Protein sequence
MPVIAVGHRG AAALAPENTL ASFARAEEIG VNQLELDLQT SSDGHVVVIH DASVDRTTNG 
TGAVADLTFE QLRVLDAGDG ATIPTFAEVL DATSVSLQVE IKATTAIEPA VELLRQRPED
ARRCEPTSFD AATVGRLAEL LPDACVGLIR KVAGPDVLDE AASLGARRVL VGLESADEAF
VRAARERGFR VDLWPIRTAD DVRRVVELGA DGFTLDDPRL VADAGFRMTP DGLVGVDVPA
RS