Gene Bcav_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1497 
Symbol 
ID7861606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1712055 
End bp1715210 
Gene Length3156 bp 
Protein Length1051 aa 
Translation table11 
GC content67% 
IMG OID643865582 
Productprotein of unknown function DUF450 
Protein accessionYP_002881515 
Protein GI229819989 
COG category[V] Defense mechanisms 
COG ID[COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0324371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACT CATCTGCCGA GCTGGCGCTC GAGGTCGAGA TCGCGGAGTA CCTGGCCGCG 
CACGGCTGGT TGTACTCGCC GAGCGGGCAG GGGTACGACG CGGGTCTCGC GCTGTTCCCG
GACGACGTCT TCGCGTGGTT GGAGGCGACG CAGCCGGCGG AGCTTGCGAA GGTCGTGACC
GCCGGGTCGG CGTCGGAGGC GAAGCAGCGC CAGCAGCTCG TGGCGGCGCT GTCCAAGCGG
TTGGACGCCC CGATGTCGCA CGGCGGTGGG ACGCTCAACG TGCTGCGGCG TCCGTTCGCG
CACGTGAACG CGCACCTGAA CATGTGTCAG TTCCGGCCGG CGACGACGTT GAACCCGAAG
ACCACCGCGG ACTATGCGGC GGTGCGGCTG CGGGTGGTGC GGCAGGTGTA CTTCTCGCCG
GTCAAGGGCG ACAACCGCGC GATCGACCTG GTGTTCTTCG TCAACGGCAT CCCGGTCGCG
ACGGCGGAGC TGAAGACGTT CTTCAAGCAG CACGTCACGT CCGCGATCGA CCAGTACAAG
CACGACCGGA ACCCGGCCGG TCAGCCGCTG CTGGGCCATG GGAACCGGGC GCTGGTGCAC
TTCGCCGTCG ACGACGACGA GGTCTGGATG ACCACCAGGC TCGCCGGCCC TAGGACGTAC
TTCCTGCCGT TCAACCGAGG CACTCTCGAC GGCGGCGCCG GCAACCCTCC CAACCCGGCC
GGTCCGGCGT CGTCGTACCT GTGGGAGCGG GTCCTGCAAC GGGACGCCTG GTTGAACATC
CTGGGTGTGC TGATGTTCGT GCGCCACGAG GAACACGTCG ACCCGATCAG CGGGAAGAAG
TCGAGGTCTT CGACGATCCT GTTCCCGCGG TTCCACCAGT GGGAGGTCGT CACCCGGCTC
GTGGACGCCG CCCGCACCGA AGGGCCTGGC GGACGCTACC TCGTGCAGCA CTCGGCCGGG
TCGGGCAAGA CCAACTCGAT CGCGTGGACG GCGCACCGCC TGGCCCGGCT GCACAACGAT
GCGAACGAGA AGGTCTTCGA CACCGTGCTG GTCATCACCG ACCGCACAGT CCTCGACAAC
CAGCTGCAGG CCGCCGTCCG GCAGATCGAC GACCGCAAGG ACCTGGTCGT TACGATCGAC
GACACCGAGG TTCGCCGCGC AGGGGGATCG AAGTCCAAGG CCCTGGCTCA GGCGCTCACG
GACAAGCGAC TGATCGTCGT GGTGACGATC CAGACGTTCC CGTTCGTGAT GGAGCAGCTG
GCCGAGAACG CGGCTCTGCG TGAGAACCGG TTCGCGATCA TCGTCGACGA GGCGCACACC
TCCCAGACTG GGGCTACCGC CTCCGAGGTT CGCAAAGTCC TGTCCGCCGG CGGCGTCGAG
GTGCCCGAGG GGGAGGAGAT CGACGCGGAG GATCTGCTCA ACTCCGCCGT CGAGCAACAG
ATCGCGGACG CGGTGACGCA GCGAGCCACG CCGTCGAACC TGTCGTACCT CGCGTTCACC
GCGACCCCGA AGGCCAAGAC GCTCGAGCTG TTCGGCCGGC CCGACCCGGA CGACCCGGAC
GGGCTCCCGC GGGCGTTCCA CCTGTACTCG ATGAGGCAGG CGATCGAGGA GGGGTTCATC
CTCGACGTTC TGCGGGGGTA CCAGACCTAC TCGACGGCCT ACGAGATCGA ACGCACCGCC
GTCGAGCACG GCGTGGACGC CTCGGCCGGG TTCACCGACG GCGACGGGGA CCTGGTCGAC
GAGAAGGCCG CGTCCCGGGC GATCATGGAG TACGTCCGGC TGCACCCGTC GAACATCGGG
CAGAAGGTGC GGATCGTCGT CGAGCACTTC CGGGCCAACG TGGCCTACCT GCTCGACGGG
CACGCCAAGG CGATGGTCGT GACGTCCTCG CGCAAGGCCG CGGTGCGGTA CAAGCTGGAG
ATTGACGCTT ACCTGCGCAC CCAGGGGTAC GCGGACATGC AGGCGCTGGT CGCGTTCTCC
GGGTCCCTCG ACGACGAGGA GTACCTGATC GAGAACGCCA GCGAAGCGAC GATGAACCCC
GGTCTGGCGT CCCTGGACTT GGCCGAAGAG TTCAAGGCTC CGCGGTACCG GGTGATGATC
GTGGCGGACA AGTTCCAGAC CGGGTTCGAC CAGCCGCTGT TGTGCGCGAT GTACGTCGAC
AAGCGGCTCG ACGGCATCGC CGCCGTGCAG ACCCTGTCCC GGCTGAACCG CACCTACCGG
GCGCCGTCAG GCGAGGTGAA GGCGACGACC TTCGTCCTGG ACTTCGTCAA CGACCCGCTG
GAGGTGCAGG CGTCGTTCGA GCCGTACTTC ACCGAGGCGC GGATCGAGAC CAGGACGGAC
CCGAACCTCG TTCACGAGGT TGCCGCAAAG CTCGCCGAGG CGGACATCTA CACCGCCGAC
GACGTCGAGA CGTTTACACA CGCGTGGTTC ACCCGGGCCG GACATGGCGC GTTGTCCGCG
GCGATCAAGG GGCCCAAGGA CACCTTCGCC ACGCTGTACG CCTCGGCCAA GACCCGGCAG
GACACCGCCG AGCTCGAGCG CCTGGAGCTG TTCCGCAAGG ACGCCGGGAC GTTCGTGCGG
CTCTACGACT TCATGTCGCA GGTCATCGAC TATGGGAGCA CGGAGCTGGA GAAGCTGTCG
GTGTTCTTGC GCCATCTCGT GCGCGTCATC GCCGTCGACC GGCTCAGCAG CGACGTAGAC
CTGTCTGACG TCGTGCTCAA GCGCGTGAAG CAGATCGACC GTGGACGCCT GGATCTCGGT
CTCACCGGCG ACGCCGTCCT TTCTCCCGCA ACGGGCGCGG GCTCCGGGGC GGCATCGCGC
GACCCGAAGC TCATCGCACT GAACGAGATC ATCCAGCGCA TCAACACCCT GTTCGCCGGA
GAGTTCGAGC CCGGGACGGT CGAGGGGTTC GTGCGCTCCG CGGCCACCGA GGTGTCCAAG
GACCCGCAGG TCGTCGCGGA GATCGAGGCC AACGAGATCG ACCAGTTCCG CAAGTCGCCC
ACCGTGCCGC ACAAGGTCAT CGACGCCGTC CTCGACGTCC CCGGCCTGAT GGAGAAGATG
ACCGGCGAGG CCATCGGCAA CCCCGCCATC ATCGCGGCCA TCGCCGAAGC GGCGTACCTG
CTGCACCAGA TCCAGCGCGC CAGAGTCCTG GAGTAG
 
Protein sequence
MSDSSAELAL EVEIAEYLAA HGWLYSPSGQ GYDAGLALFP DDVFAWLEAT QPAELAKVVT 
AGSASEAKQR QQLVAALSKR LDAPMSHGGG TLNVLRRPFA HVNAHLNMCQ FRPATTLNPK
TTADYAAVRL RVVRQVYFSP VKGDNRAIDL VFFVNGIPVA TAELKTFFKQ HVTSAIDQYK
HDRNPAGQPL LGHGNRALVH FAVDDDEVWM TTRLAGPRTY FLPFNRGTLD GGAGNPPNPA
GPASSYLWER VLQRDAWLNI LGVLMFVRHE EHVDPISGKK SRSSTILFPR FHQWEVVTRL
VDAARTEGPG GRYLVQHSAG SGKTNSIAWT AHRLARLHND ANEKVFDTVL VITDRTVLDN
QLQAAVRQID DRKDLVVTID DTEVRRAGGS KSKALAQALT DKRLIVVVTI QTFPFVMEQL
AENAALRENR FAIIVDEAHT SQTGATASEV RKVLSAGGVE VPEGEEIDAE DLLNSAVEQQ
IADAVTQRAT PSNLSYLAFT ATPKAKTLEL FGRPDPDDPD GLPRAFHLYS MRQAIEEGFI
LDVLRGYQTY STAYEIERTA VEHGVDASAG FTDGDGDLVD EKAASRAIME YVRLHPSNIG
QKVRIVVEHF RANVAYLLDG HAKAMVVTSS RKAAVRYKLE IDAYLRTQGY ADMQALVAFS
GSLDDEEYLI ENASEATMNP GLASLDLAEE FKAPRYRVMI VADKFQTGFD QPLLCAMYVD
KRLDGIAAVQ TLSRLNRTYR APSGEVKATT FVLDFVNDPL EVQASFEPYF TEARIETRTD
PNLVHEVAAK LAEADIYTAD DVETFTHAWF TRAGHGALSA AIKGPKDTFA TLYASAKTRQ
DTAELERLEL FRKDAGTFVR LYDFMSQVID YGSTELEKLS VFLRHLVRVI AVDRLSSDVD
LSDVVLKRVK QIDRGRLDLG LTGDAVLSPA TGAGSGAASR DPKLIALNEI IQRINTLFAG
EFEPGTVEGF VRSAATEVSK DPQVVAEIEA NEIDQFRKSP TVPHKVIDAV LDVPGLMEKM
TGEAIGNPAI IAAIAEAAYL LHQIQRARVL E