| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1453 |
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| Symbol | |
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| ID | 7860922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1655993 |
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| End bp | 1656751 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643865540 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002881473 |
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| Protein GI | 229819947 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.950748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGTC ATGACTCCGC GCGCGAGCGT GTCGCGGTGG TGACGGGCGG CGCCCGCGGC
ATAGGACTGG AGATCGCGCG GCGTCTCCTG GACGACGGTC ATCGCGTGGC GGTGCTCGAC
GTGCTCGACG ACGTCGAGGC GGTGGCCGCA CGGCTCGACG CGGAACGCTG CCGGGGGATC
GTCGCCGACG TGTCCGACCC GGCGGCCGTG GCCCGTGCGT TCGACGACGT CGACTCGCTC
TGGGGGCGCG TCGACATCCT CGTGAACAAC GCTGCCCTGA CCGCCGTTCA CCGGCCGTGG
CGCGCGGTCG AGCCGGCGGA CTGGGACCGT GTGATGGCGG TCAACCTTCG ATCCGCGTTC
CTGTGCTCAC GCGCGGCTGT GGCGTCGATG GAGGCGCGAG CCTGGGGGCG GATCGTCAAC
ATCAGCTCGG TCACGTTCCA CTCCGGCCAG CGGCACCTCG TCGACTACGT CGCGTCCAAG
GGCGGTCTCG TGGGCTTCAC GCGTGCACTG GCGCGCGAGG TCGGCGCGAG CTTCGTCACT
GTCAACGCTC TGGCTCCGGG ATCGATCCGG ACGGAGGCCG ACGTCGTCAA CTTCCCCGAC
CAGGACGCGA TCGACGCCCA GCAGGCAGCG GTTCAGGCCA TCCCGCGTCG CGGAGTGCCG
GCTGACGTCG CGGCGGCCGC GTCGTTCTTG TGCGGAGACG ACGCGTCGTT CATCACTGGC
CAGCTCCTCA CCGTCGACGG CGGATGGTTC ATGCGCTAG
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| Protein sequence | MSGHDSARER VAVVTGGARG IGLEIARRLL DDGHRVAVLD VLDDVEAVAA RLDAERCRGI
VADVSDPAAV ARAFDDVDSL WGRVDILVNN AALTAVHRPW RAVEPADWDR VMAVNLRSAF
LCSRAAVASM EARAWGRIVN ISSVTFHSGQ RHLVDYVASK GGLVGFTRAL AREVGASFVT
VNALAPGSIR TEADVVNFPD QDAIDAQQAA VQAIPRRGVP ADVAAAASFL CGDDASFITG
QLLTVDGGWF MR
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