Gene Bcav_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1360 
Symbol 
ID7861660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1553537 
End bp1554967 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content73% 
IMG OID643865444 
Producthistidine kinase 
Protein accessionYP_002881381 
Protein GI229819855 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.388977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCG TGACCCCCAC CGAGCCGCTC CCGCGGCCGG GAACCCCCGA TGCGGCGTCG 
GCCGCCGAGA CAACGACGAT CCCGCCCACG CCGGCGATCC GCCTCGACCC CCGGTTCGTC
GACCGCCGCG AAGAGCTGCC GTTCCTGCGA GGGCCGTTCA CGCGCCGCGC CTGGAGCGAG
TTCGGCTTCC TCAACCTCGC TTTGCTGCTC GCCCCGTTCG CGCTCGCCTA CGCCCTGTTC
ACCGTGTCGG TGCTCGCCGG GCTGCTGGTG ACGGTCGTCG GCCTGTTCGT GGCCGGCGGC
CTCGTGATCG GGGCGCGGGG ATGGGGAGCG ACGTACCGGT CGATGGCCTC GAGCATGCTC
GGGATCGACG TCGTGGCCCC GGTCGAGCGG AGGCTCGCCA CCGGGTTCTG GCGCCGGCTG
CGGTCGATGC TGTTCGACGG GCCGGGGTGG CGAGCGGTCC TGTTCCTGAT CGTGACGTTC
CCGCTCGCGA TCGCGGGCTT CGTGCTGTCG TGGACGTTCC TCGCGACCGG GCTCGGCGCG
ATGACGCACT GGATCTGGTC CCGCTGGCTG CCGCTCCAGC AGGCCGGCGA CGGCACCTGG
CACCGAGGCG CCTCGTTCGG CCTCGACTTC TTCATCGACA CACCGATCCG TCAGGCCGGC
CTCGTGCTCG TCGGCGTGCT CTTCCTGCTG CTGTGGCCGC AGGTGCAGCG GGCCTTCGCC
CAGCTGTTCC GGCTGCTCGT CGTGGCCCTG CTCGGCCCGA CGCTCACGAG CCTGCGGGTG
CGTGACCTCG AGCACGCCCG CGGCTCGATG GCTGACGACG CCGACGCCCG CCTGCGCCGC
ATCGAGCGGG ACCTGCACGA CGGCACCCAG GCGCGCCTGG TCGCCGTCGC GATGCAGCTC
GGCGAGGCGA AGGAGCAGCT GACGACGACC CAGACCGACC CGGAGCTCGT CGACCTGGTC
TCGAACGCGC ACGCCTCCAC CAAGGAGGCG ATCGCGGAGC TGCGCGAGCT GGCCCGCGGC
ATCCACCCGC CCGCGCTCGA CGCCGGCCTC GCGGTCGCGC TCGAGACGCT CGCCGCCCGC
TCCCCGCTGC CGGTCACCGT CGACGTCGAC GCGAGCGCGA AGCCCGCGCC GGCCGTCGAG
ACGATCGCGT ACTTCTGCGT CGCCGAGCTC GTGACCAACG CCGTCAAGCA CGCCGGCGCC
AGCGGCGTGT ACGTGCTCGT GGAGCAGCAG GGCACCTCCT TGCGGCTGCG GGTGCGTGAC
GACGGCCGCG GGGGCGCCGC GATCACGCAA CCGGACGCGA AGGGGCACCG GTCCGGCCTC
GCGGGCCTCG CGGAGCGGGT GCGCGCCGTG GACGGGACCT TCGACGTCGT CAGCCCGGCC
GGCGGGCCTA CGGTGGTGAC CGTGCTGCTG CCGATGAGCG TCTCCGCATG A
 
Protein sequence
MSTVTPTEPL PRPGTPDAAS AAETTTIPPT PAIRLDPRFV DRREELPFLR GPFTRRAWSE 
FGFLNLALLL APFALAYALF TVSVLAGLLV TVVGLFVAGG LVIGARGWGA TYRSMASSML
GIDVVAPVER RLATGFWRRL RSMLFDGPGW RAVLFLIVTF PLAIAGFVLS WTFLATGLGA
MTHWIWSRWL PLQQAGDGTW HRGASFGLDF FIDTPIRQAG LVLVGVLFLL LWPQVQRAFA
QLFRLLVVAL LGPTLTSLRV RDLEHARGSM ADDADARLRR IERDLHDGTQ ARLVAVAMQL
GEAKEQLTTT QTDPELVDLV SNAHASTKEA IAELRELARG IHPPALDAGL AVALETLAAR
SPLPVTVDVD ASAKPAPAVE TIAYFCVAEL VTNAVKHAGA SGVYVLVEQQ GTSLRLRVRD
DGRGGAAITQ PDAKGHRSGL AGLAERVRAV DGTFDVVSPA GGPTVVTVLL PMSVSA