| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1353 |
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| Symbol | |
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| ID | 7861653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1546232 |
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| End bp | 1547314 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643865437 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_002881374 |
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| Protein GI | 229819848 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.146603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.383491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGC ACCCCACCCG CCGAGCGATC GGCGCCAAGG CGCGTCTCGC CGTCGTCGCC
GCCACGCTCG GCGCTGGCGC TCTCGTGCTG TCGGCCTGTA CGAGCAACGA ACCCGCCGAG
GAGGAGACAC CGGCGGCGGA GGACGACGGC GGAGGCGAGG CCGGCGGCGG CGCCAACGAC
GAGCCGGGCG AGACGGTCGT GATCGGCTTT TCGGCGCCAG CCGCCGACCA CGGCTGGATG
GCCGCGATCA CCGAGCGCGC GCAGGAGTAC GCGGACGAGC ACAGCGACAT CGACCTCCAG
GTCGCCGAGG GCACGAACGA CGTGAACCTC CAGATCAGCC AGGTCGAGCA GTTCATCAAC
GACGGCGTGG ACGCGATCGT GCTGCTGCCG TTCGACGGCG CGGCGCTCAC CGAGGTGGCG
CTCGAGGCGA TGGAGGCGGG CATCGTCGTC GTGAACGTCG ACCGCGAGTT CAACGACCCG
AACGCCGCCC GCGTCACGGT GCTCGGCGAC AACTACGGCA TGGGCGTCAG CGCGGGGCAG
TACATCTGCG AGCAGCTCGG CGACAACCCG GACGCGATCG TGGCGGAGAT CGCCGGCATC
GACTCGCTTC CCCTGACGCA GGACCGCAGC CAGGGCTTCG AGGACGCGCT CGGGGAGTGC
GGGCTCGACG TCGACAACCG GGTCGCCGCC GACTTCACGA TCCAGGGCGG GACCGCCGCC
ACGGAGCAGC TGCTCGCGGC GGCCCCCCAG ATCGACGCGA TCTGGAACCA CGACGACGAC
CAGGGCGTCG GCGTCCTCGC CGCGATCGAG ACGGCCGGAC GCGACGAGTT CTTCCTCGTG
GGTGGTGCCG GCTCGGTGAA CATGATGGAG GAGATCCAGA ACCCCGACTC CATCGTCGAG
GCGACGGTCA TCTACCCGTC GACGCAGGCG GCGGACGGCA TCGCGCTCGC CCGCCTCGTC
GTCCAGGGGC GGAGCATGTC CGACCTCGTC GAGGTCGAGG TCCCACGCCT CGTCCAGCTG
TACGCGCCGG TCGTCACGGC CGATAACGTC GAGCAGTACC TGCCGACCGC GTTCGAGTCC
TGA
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| Protein sequence | MSQHPTRRAI GAKARLAVVA ATLGAGALVL SACTSNEPAE EETPAAEDDG GGEAGGGAND
EPGETVVIGF SAPAADHGWM AAITERAQEY ADEHSDIDLQ VAEGTNDVNL QISQVEQFIN
DGVDAIVLLP FDGAALTEVA LEAMEAGIVV VNVDREFNDP NAARVTVLGD NYGMGVSAGQ
YICEQLGDNP DAIVAEIAGI DSLPLTQDRS QGFEDALGEC GLDVDNRVAA DFTIQGGTAA
TEQLLAAAPQ IDAIWNHDDD QGVGVLAAIE TAGRDEFFLV GGAGSVNMME EIQNPDSIVE
ATVIYPSTQA ADGIALARLV VQGRSMSDLV EVEVPRLVQL YAPVVTADNV EQYLPTAFES
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