Gene Bcav_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1333 
Symbol 
ID7861633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1515531 
End bp1516466 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content76% 
IMG OID643865417 
ProductThioredoxin domain protein 
Protein accessionYP_002881354 
Protein GI229819828 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC CTCCCCAGAT CAACCTGCGT GGCGCCGTCG ACCTCTCCGG GCTGCGGGCG 
CCGCGCCCGG CGCCGGGTGC GGAGGGCGCC GACGCCGCGA TCGCCGACGG CGGCGTGGTC
GTCGAGGTGT CCGAGGCGAC GTTCGGCGAC CTGATCCAGC GGTCGACCGA CGTGCCGGTG
GTCGTCGACC TCTGGTCGGG TCGGGCCGAG GCGAGTGCGC AGCTCTCCGC GCTGCTGCGG
CAGCTCGCGA CGGCGTACGG CGGCCGCTTC CTGCTGGCGC GGGTCGAGGT GGACGCGAAC
CCTCAGATCG CGCAGGCGTT CCAGGTGCAG GCGATCCCCA GCGTGGTCGC CATCATCAAG
GGGCAGCCCG TCCCGCTGTT CCAGGGCGCG TACCCGGAGG CGCAGGTGCG TCAGGTGCTC
GACGAGCTGC TGCGGGTCGC GGCCGAGAAC GGCGTGACCG GGCGGGTCGA CGTCGGCGAG
GAGCCGGCGG AGGAGGAGCC GGAGCCCGCG GAGCCGGAGC TTCCGCCGCT GCACGCCGCG
GCGTACGACG CGATCGAACG CGGGGATCTC GACGCCGCGG CTCAGGCCTA CCGCGACGCC
CTCGCCGAGA ACCCCGCGGA CGCCGACGCC AAGGCAGGCC TCGGGCAGGT CGAGCTCATG
GCCCGCGTGG GCGACGCCGA CCCGGCGTCC GTGCTCGCGG CGGCCGACGC CGCACCGCCG
ACCGACGTCG ACGCGCACCT GGCCGCCGCG GACGTGGAGT TCGGGGCCGG GCGGGCCGAG
GCCGCGTTCG ACCGGCTGAT CGCCGTCGTG CGGGCGACGT CGGAGGCGGA CCGGGACCGA
GCGCGGACCC GGCTCCTCGA CCTCTTCGCG CTGACGGATC CGGCGGCGCC GGAGCTCCAG
CGGGCGCGGC GCGCGCTCGC CTCCGCGCTG TTCTGA
 
Protein sequence
MSQPPQINLR GAVDLSGLRA PRPAPGAEGA DAAIADGGVV VEVSEATFGD LIQRSTDVPV 
VVDLWSGRAE ASAQLSALLR QLATAYGGRF LLARVEVDAN PQIAQAFQVQ AIPSVVAIIK
GQPVPLFQGA YPEAQVRQVL DELLRVAAEN GVTGRVDVGE EPAEEEPEPA EPELPPLHAA
AYDAIERGDL DAAAQAYRDA LAENPADADA KAGLGQVELM ARVGDADPAS VLAAADAAPP
TDVDAHLAAA DVEFGAGRAE AAFDRLIAVV RATSEADRDR ARTRLLDLFA LTDPAAPELQ
RARRALASAL F