Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1297 |
Symbol | |
ID | 7858760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1473650 |
End bp | 1474489 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643865381 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002881318 |
Protein GI | 229819792 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.983189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTCG TCATTCCCGC CGCGCTGTAC GTGGTCATCT TCCAGCTCGG CCCGGTGGTG TACGGCCTCG TGCTCAGCTT CAGCGCCTAC TCGCCGCTGG ACAGATCAGG TCCGCAGTTC ATCGGGTGGG ACAACTACGC CTCCATCTTC ACCGACCCGA CGTTCGCCCG GGCGATGGCC ATCACCGGCC GCTACGTGCT CCAGGTGCTG CCGTTCACCG TCGTGATCGC GCTCGGGCTC GCGCTGCTGT CCAACCGTGT GTTCCGAGGT GTCGGGCTCT TCCGCACCGG GCTCTACGTG CCTCACGTCG TGTCGCTCAC GGCCGTGAGC ATGGTGTGGC TCTGGATCTA CTCGGACACC GGGCTCGTCA ACCAGGTGCT GGACCTCGTG GGTCTTCCCG GCCAGCGATG GTTGACCACG CAGGACGCCG CGCTCAACGC CGTCTCGGCC ATGCGCATCT GGAAAGCGCT CGGGAGCAAC ATGGTGCTGC TGCTCGCCGG GCTGCAGACC GTGCCGAAGG TCCTGTACGA GGCGGCCAAG GTGGACGGCG CGAACGCGTG GCAGCAGTTC CGTGCGGTGA CGCTGCCCGG CCTGCGGCCG ATGCTGACCT ACGTCGTCGC GATGGACATC ATCTTCCTCG CGCAGGGCTT CCCGGAGATC TTCGTGCTCA CACAGGGCGG ACCGTACGGG AGCACGACGA CCGTGAACTA CCTCATCTAC ACCGAGGCGT TCCAGTACAA CGAGATGGGC AGCGCGTCAG CGATGGCGTT CGTGCTGTTC GCGTTCATCG CAGCGTTGAC GATCGTCGCG CTCCGCGTCG GGCAGGGAAG GAAGAGCTGA
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Protein sequence | MLFVIPAALY VVIFQLGPVV YGLVLSFSAY SPLDRSGPQF IGWDNYASIF TDPTFARAMA ITGRYVLQVL PFTVVIALGL ALLSNRVFRG VGLFRTGLYV PHVVSLTAVS MVWLWIYSDT GLVNQVLDLV GLPGQRWLTT QDAALNAVSA MRIWKALGSN MVLLLAGLQT VPKVLYEAAK VDGANAWQQF RAVTLPGLRP MLTYVVAMDI IFLAQGFPEI FVLTQGGPYG STTTVNYLIY TEAFQYNEMG SASAMAFVLF AFIAALTIVA LRVGQGRKS
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