Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1280 |
Symbol | |
ID | 7858743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1454904 |
End bp | 1456271 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643865365 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002881302 |
Protein GI | 229819776 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.199446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.205657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCGG AGCGGACCGA GATCCAGCCA GGTGTCGGCG CGGGCGAGCC GCCCTGGTCG GCCGGCGTCG CCCGCCGTGC CACCGGAGAG CTCGAGGTCG CCGGCGTGCC GGTGAGCGAC CTCGCCGGCC GCTTCGGCAC CCCCGTCTAC GTGCTGGACG AGGCGGATCT GCGCGCCCGT GCCCGCGCGT ATCGCGACGC GTTCACCCGC GAGCTGGCGC CGTCGAGCGT CCACGTCTAC TACGCGGGCA AGGCGTTCCT CTCGATCGCC GTCGCACGCT GGGTGCACGC CGAGGGCCTG CGCATCGACA CGGCGACGGG CGGTGAGCTC GCCGTCGCCC TGCGGGCCGG GATCCCGGGC GCCGACATCG GCATGCACGG CAACAACAAG TCGGACGCGG AGATCGACCG GGCGCTCGCG GCGGGCGTGG GACGCATCGT GGTCGACTCC CTGCCGGAGG TCGCTCGCGT GGCCGACGCC GCCGCGCGCC GCGGCGTGCG GGCTCCGGTC ATGGTCCGGG TCACCACGGG CGTCCACGCC GGGGGGCACG AGTACATCTC CACGGCGCAC GAGGACCAGA AGTTCGGGCT GTCGATCGCG GCCGGCCGGG CGGAGGAGGC GGTCGCCGCC GTGCTCGCTC GCCCGGAGCT CGAGCTGCTC GGCCTGCACT CCCACATCGG TTCGCAGGTC CTCGAGGCGG AGGCGTTCAC CGTCGCCGCC CGGTCCGTGC TCGAGCTGCG TGCGCGGATC GCCGAGACGC ACGGCGTGCT CGTGGGCGAG GTGGACCTCG GCGGCGGGTA CGGCGTCGCC TACCTTCCCG GCGAGGTGCC GCTCGACCCG GCGATGCTCG CCGCTGAGCT CGCCCGCACC GTCCGCGAGG TGTGCGCGGA GCTGGGCACC GACGTTCCCG ACGTGTCGAT CGAGCCCGGC CGCGCGATCG TCGCTCCGGC CGGGTGCACG CTCTACACGG TGGGGACCGT CAAGCCCGTG CGCGCGACGG ACGGGGCCGA CCGGCTGTAC GTCTCCGTCG ACGGGGGCAT GAGCGACAGC ATCCGGCCCG CGCTCTACGG CGCGGCGTAC ACGGCGACGA TCGCCTCCCG CGCCTCGGCG GCGCCGCCGG TGCGCTCGCG CGTCGTCGGC AAGCACTGCG AGAGCGGTGA CATCGTGGTG CACGACGTCG ACCTGCCCGC CGACGTCGCG GCCGGCGACC TGCTCGCCGT CCCGGCGACG GGCGCGTACG GCAGGTCCAT GGCCAGCCAG TACAACCTCG TGCCGCGGCC CGGCGTCGTC GCCGTCGCCG GCGGCGAGGC CCGCGCCGTG ATCCGGCGCG AGACCGAGGA GGACGTGCTC GCGCTCGACC TGGGCTGA
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Protein sequence | MEAERTEIQP GVGAGEPPWS AGVARRATGE LEVAGVPVSD LAGRFGTPVY VLDEADLRAR ARAYRDAFTR ELAPSSVHVY YAGKAFLSIA VARWVHAEGL RIDTATGGEL AVALRAGIPG ADIGMHGNNK SDAEIDRALA AGVGRIVVDS LPEVARVADA AARRGVRAPV MVRVTTGVHA GGHEYISTAH EDQKFGLSIA AGRAEEAVAA VLARPELELL GLHSHIGSQV LEAEAFTVAA RSVLELRARI AETHGVLVGE VDLGGGYGVA YLPGEVPLDP AMLAAELART VREVCAELGT DVPDVSIEPG RAIVAPAGCT LYTVGTVKPV RATDGADRLY VSVDGGMSDS IRPALYGAAY TATIASRASA APPVRSRVVG KHCESGDIVV HDVDLPADVA AGDLLAVPAT GAYGRSMASQ YNLVPRPGVV AVAGGEARAV IRRETEEDVL ALDLG
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