| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1241 |
|---|
| Symbol | |
|---|
| ID | 7859552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1404458 |
|---|
| End bp | 1406221 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865325 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002881263 |
|---|
| Protein GI | 229819737 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.560474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC GGGCCGACCA GACCCCCGCG GTTCCCACGC CGGAGGGTGC GGCCTCCGGC
GACCAGCCCC GTCCTCGGCC GGGCGCGCTG CGGCGGTTCT GGCACCGGGG TCGCCTGCGC
GTGCGGGCGT TGCGGCTGTG GCGCTCGTGG CGCCGGTCGC TCCGCCTGAG GGTCGTCGTC
ACGACCGTCG CGATCGGCCT CGTCGGCCTC GTGGCCCTCG GCGCGTACCT GTCCGAGCAG
GTGCGCGACA CACTGTACGA GCAGCGCCGC GACGTCGTTC TGGCCGACGC CGCATCCCAG
ACGGCGATCG CCCAGCAGCG CTTCGACGCG GCGAGCGCCA CCACGAGCGC CCAGGTGCAG
CAGCTCGCCC AGGACCTCGT CTCCACCGCG CAGAGCCCTG GTTCGGGCTC CGTGGGCACG
TTGTTGCTGA GGAGCCCGAG CGACGAGCCG CCGGTCATCC TCGACGTCGT GAGCAGAGGC
GGGCCGTTCG ACGTGTCCGA CGTGTCCGAC GAGCTGCGGG CCGCCGTCCG GGACTCGGGT
GGGCAGCAGT GGCAGGCTGT CGGGCTCGCG GAGCCGGGTG GAACGCAGGA CCCGGGGATC
GTCGTCGGTG CTCCGGTCGT GCTGCCGCAG GCCGGCGCGT ACGAGCTGTA CTTCGCCTAC
AGCCTGGCGC CGGAGCAGGA CACGCTCCAG CTGATCCAGC GCACGCTGGC GATCGGCGCC
GTCGTGCTCA TCGCCCTTCT CGTGGCGATG ACGTGGTACC TCACGCGCCA GGTCCTCGCG
CCGGTCCAGC AGGCGGCGCA CATCGCGGAG CGACTCGCGG ACGGCGAGCT CGACGAGCGG
ATGACCGTGC GCGGTCAGGA CGAGCTCGCG TCGCTCGCCC GCACGTTCAA CGAGATGGCG
GAGAGCCTGC AGCACCAGAT CGAACGGCTG GCCGAGCTCT CGCGGGTGCA GCAGCGGTTC
GTGTCGGACG TCTCGCACGA GCTGCGGACG CCCCTGACGA CGATCCGGAT GGCCGCCGAG
ATCCTCTTCG CGGAGCGGCA CGAGTTCGAC CCGGCGACCC GGCGGTCCGC GGAGCTCCTG
CACGCGCAGC TCGACCGGTT CGAGGAGCTC CTGGCCGACC TGCTCGAGAT CTCGCGGTTC
GACGCGGGCG CCGCCGTGCT CGACGTCGAG CACCTCGACG TCCGCACGAT CGTGCACCGG
ACCGTCGATC TCACGGCACC GCTCGCGGAG CGGCGGGGGA GCACGGTCCT CGTGCTCGAG
GGGGACCGGC CGTGCACGGC CGACATCGAC CCACGGCGGG TGGAACGCGT CCTGCGCAAC
CTGCTCGTCA ACGCGATCGA GCACGGGGAG GGCCGGCCGA TCGAGGTGCA CGTCGGGGCC
AACGCCCGAG CCGTGGCCGT CGCGGTGCGG GACCACGGCG TCGGGATGAC CGTGCGGGAG
GCCGAGCACG TCTTCGACCG GTTCTGGCGC GCCGATCCTG CGCGGACCCG GACCACGGGC
GGTACCGGTC TCGGCCTGTC GATCTCGCTC GAGGACGCCC GGCTGCACGG GGGGCGGCTC
GAGGCGTGGG GCACGCCGGG CGACGGCGCC ACGTTCGTGC TCACGCTGCC CCGCCGGGCG
GGGTTGGACA TCGGAGCGTC CCCGCTGGAG CTCGCGCGCC CCGGCGGCGA CGACGGGCCG
GGGCACGGCG GGAAGCCGGC GCCACGGGAC GAGGGGTCGA GCGGCCCGGC GGCGGTGCCC
GACCTGGACG AGGTGAACCG ATGA
|
|---|
| Protein sequence | MTTRADQTPA VPTPEGAASG DQPRPRPGAL RRFWHRGRLR VRALRLWRSW RRSLRLRVVV
TTVAIGLVGL VALGAYLSEQ VRDTLYEQRR DVVLADAASQ TAIAQQRFDA ASATTSAQVQ
QLAQDLVSTA QSPGSGSVGT LLLRSPSDEP PVILDVVSRG GPFDVSDVSD ELRAAVRDSG
GQQWQAVGLA EPGGTQDPGI VVGAPVVLPQ AGAYELYFAY SLAPEQDTLQ LIQRTLAIGA
VVLIALLVAM TWYLTRQVLA PVQQAAHIAE RLADGELDER MTVRGQDELA SLARTFNEMA
ESLQHQIERL AELSRVQQRF VSDVSHELRT PLTTIRMAAE ILFAERHEFD PATRRSAELL
HAQLDRFEEL LADLLEISRF DAGAAVLDVE HLDVRTIVHR TVDLTAPLAE RRGSTVLVLE
GDRPCTADID PRRVERVLRN LLVNAIEHGE GRPIEVHVGA NARAVAVAVR DHGVGMTVRE
AEHVFDRFWR ADPARTRTTG GTGLGLSISL EDARLHGGRL EAWGTPGDGA TFVLTLPRRA
GLDIGASPLE LARPGGDDGP GHGGKPAPRD EGSSGPAAVP DLDEVNR
|
|---|
| |