Gene Bcav_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1234 
Symbol 
ID7858890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1395934 
End bp1397472 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content71% 
IMG OID643865318 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_002881256 
Protein GI229819730 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.217111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG CTCCCGTCAT CGCCACCGCG CCCTCCGGCC TCGCCTACCG CGTGGCCGAC 
CTGGCGCTCG CCGAGGCCGG CCGGCACCAG ATCCGGCTCG CCGAGCACGA GATGCCGGGG
CTCATGGCGC TGCGGCGGGA GTACGCGCAG GTGCAGCCGC TCGCGGGCGC GCGGATCGCC
GGCTCCCTGC ACATGACCGT CCAGACCGCC GTCCTCATCG AGACGCTCGT GGCGCTGGGC
GCCGACGTCC GCTGGGCGAG CTGCAACATC TTCTCGACGC AGGACGAGGC GGCGGCCGCC
GTCGTCGTCG GACGCCCCGA GACCGGAGGG ACGCCGGACG ACCCGCGCGG GACGCCGGTG
TTCGCGTGGA AGGGCGAGTC GCTCGCCGAG TACTGGGAGT GCACCGAGGC GATCCTGGCG
TGGCCGTCGG CGTCCGACGG GACGGGCGGA CCGACGCTCA TCCTCGACGA CGGCGGCGAC
GCCACGATGC TCGTGCACTC CGGAGTGCGC TACGAGGCGG CCGGCGCGGT GCCGTCCGAT
CCCCGCCCGG GCGAGCCCGG CTACTCCGAG GAGCACCTCG TGGTGCTCGA CGTGCTGCGC
CGCTCGCTGG CCGCCGACCC GCAGCGCTGG ACCCGCATCG CCTCCGCCAT CGGAGGCGTC
AGCGAGGAGA CGACGACGGG CGTGCACCGC CTGTACCAGC TGGCCGCCGC GAAGGAGCTG
CTGTTCCCGG CGATCAACGT CAACGACTCG GTGACGAAGT CGAAGTTCGA CAACCGGTAC
GGCATCCGGC ACTCCCTGCC GGACGGGCTG AACCGCGCCA CCGACGTGCT CATCGGCGGC
AAGGTCGCGT TCGTCGCGGG CTACGGCGAC GTCGGCAAGG GTGCCGCGGA GTCCCTGCGC
GGGCAGGGCG CGCGCGTGGT GGTGGCCGAG GTCGACCCGA TCTGCGCGCT GCAGGCGGCG
ATGGACGGGT TCCAGGTCGT GCGGCTCGAG GACGTCGTGG GGGAGGCGGA CTTCTTCATC
ACGACCACCG GGAACTTCGA CGTCATCCGC GTCGAGCACA TGGCCGCGAT GAAGGACAAG
GCGATCGTCG GCAACATCGG GCACTTCGAC AACGAGATCG ACATGGCCGG GCTCGCCGCG
GTGCCGGGCA TCGTGCGGAC CGAGATCAAG CCCCAGGTCC ACGAGTGGAC GTTCCCGGCG
GGCGCGCCGG GAGGCGAGGG CGACGACGCC GAGCGCGGCG AACGGTCGAT CATCGTGCTG
TCGGAGGGCC GCCTGCTCAA CCTCGGGAAC GCCACGGGTC ACCCGTCGTT CGTGATGAGC
AACTCGTTCG CGAACCAGGT CATCGCGCAG ATCGAGCTGC ACACCTCGGA CGCGTACGAG
AACGAGGTCT ACCGGCTGCC GAAGATCCTC GACGAGAAGG TCGCGCGGCT GCACCTGGAC
GCGCTCGGCG TCGAGCTGAC GGAGCTCACG AAGGAGCAGG CCGACTACAT CGACGTCGAC
GTGGCGGGGC CGTACAAGCC GGACCACTAC CGCTACTGA
 
Protein sequence
MSAAPVIATA PSGLAYRVAD LALAEAGRHQ IRLAEHEMPG LMALRREYAQ VQPLAGARIA 
GSLHMTVQTA VLIETLVALG ADVRWASCNI FSTQDEAAAA VVVGRPETGG TPDDPRGTPV
FAWKGESLAE YWECTEAILA WPSASDGTGG PTLILDDGGD ATMLVHSGVR YEAAGAVPSD
PRPGEPGYSE EHLVVLDVLR RSLAADPQRW TRIASAIGGV SEETTTGVHR LYQLAAAKEL
LFPAINVNDS VTKSKFDNRY GIRHSLPDGL NRATDVLIGG KVAFVAGYGD VGKGAAESLR
GQGARVVVAE VDPICALQAA MDGFQVVRLE DVVGEADFFI TTTGNFDVIR VEHMAAMKDK
AIVGNIGHFD NEIDMAGLAA VPGIVRTEIK PQVHEWTFPA GAPGGEGDDA ERGERSIIVL
SEGRLLNLGN ATGHPSFVMS NSFANQVIAQ IELHTSDAYE NEVYRLPKIL DEKVARLHLD
ALGVELTELT KEQADYIDVD VAGPYKPDHY RY