Gene Bcav_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1199 
Symbol 
ID7858855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1358767 
End bp1361592 
Gene Length2826 bp 
Protein Length941 aa 
Translation table11 
GC content73% 
IMG OID643865283 
ProductCDP- glycerol:poly(glycerophosphate)glycerophosph otransferase 
Protein accessionYP_002881221 
Protein GI229819695 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.457578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG CCCGACGCGA ACCGGCAGAG CGCGGCGACG AGGCGCGCCC CGACGTGACA 
GTCGTCGTCA TCTCGTTCAA CGACGCCGAG CACCTCGCGG ACGCCGTGCG CTCGGTCACC
GGCCAGACGC TGAAGAACCT CGAGGTGATC GTCTCCGACG ACCACTCGAC GGACGGCACG
CCCGACCTGG TCGCGACGCT CGCCGCCGAG GACGCCCGGG TGTCCTACCA GCGACTGCCG
CAGAACTCGG GCGGCTGCGG CGCGCCACGG AACGTCGGCC TGAGCCACGC CCGCGGCCGC
TACGTCATGT TCCTCGACTC GGACGACACG CTCGAGCGTC ACGCGTGCAA GAACCTCCTC
CTGGCGGCGG AGGCGACGGG CGCGGACGTC GTGTCGGGCA AGACGGAGCG CGTCGAGGTG
GACACCGGCG TGCGGTCGCC CTGGTACGGC AACCTGTACG CCGAGCCGCG CGTGGTCCGC
TCGCTCGACG AGTTCCCCGA GCTCCTGCAC GACACCGTCT CGACGAACAA GCTCTACCGG
CGTCAGTTCC TGCTCGACTC GGGCCTGCAG TTCCCGGAGG GGATCCACTA CGAGGACCTC
GTGTTCACAG CGCGCCTGTA CACGACGGCG CCGAGCATCG CGATCATCCC GGAGCTCGTC
TACAACTGGC ACGTCTACGC GAGCGAGGTC CGGCGCTCCA TCACCAACCA GCGCATGAGC
GAGCGCAACC TCGCCGACCG GCTCGCGGCC CTCGACCGGG TCGCGGAGGC CTACGCGGTG
TGCGGCCCCG AGGTCCAGGC GGAGCAGGCA CGCAAGGTGC TGACGCACCA TCTCCGCCTG
TACCTCAACG ACATGGCGGC GGCGGACGAC GCGTGGGCGC ACGCCGTCGT CACGGCGATC
CGGCCGTACG TCGCCGCCGC GGGGCTCCCG GCGGTCGCGG CGCTGACGCC GTTCGAGCGG
TTCCTGTACG CCTGCGTGCT CGACGGCGAC GTCGACGGCG CGCGGCAGGC GGTCGTGGGG
GCGCAGTCCG GCGCGATGAC GGGCCGGTTC ACGCGTGCCG GCAGCGCCGA GGTCTGGACC
CCGCGCGAGG GCGACACGCC GCCGCCGGAG GGAACGGCCG AGCGCGACCT GCTCACCGTC
GACCCGCGAC TCGTGCGCAT CCCGCACCCG GCGATGCCGT ACTGCCACGA GGTCGTCTCC
GTCCGGCACA GCGGTCTGGG CTACGTGCTC GACGGCGTGA CGTCCGATCC CGTCGGCCGC
CTCGAGGCAG AGCTGGCCGA GCTCGTGGTG GAGGTCCGCA CGCCGTCCGG CGCGGTGCTC
GCCCGGCACC CGGCCACGAC CGAGGCCACC GGGTCGGTGA TCAGGTGGTC CGCGCGGATC
GACGCTCCCG CCCGCCGCGG GTTGCGGGAG TGGGAGCCGC GCACGCCGGT GGTCGTGACC
CGCCTCGCCT CCGGCTCGGT GAGCACGGGG CCGCTGCGCG CCGGGCGGGC AGCGAACCAG
CTCGCGCTGC GCGACGGATC GGCGCTGGGG CGGGCGCTCG GTGACCGCTG GGTGCTCGAG
ACCGAGCCGT ACGAGCCGAT CGAGCTGCGC ATCGAGGCGA CCCGCCGGGG GCACGCCGTG
CGCGCCGCCG GCAAGCGAGC GGAGGCCGCG CTGGCCCCGG TGCAGCGCCT GGCCGCGCGC
GGGCGGGCGG CCCTCGAACC GACCGGACCC CTGGGACGCG CGGCGTACGC CGCCCTGCGC
CGGCTCCCGC TGGAGGAGGA CCTCGCGTTC TTCGAGTCGT ACCTCGGCCA GAGCACGCAG
GACAGCCCGC GCCAGGTGTA CGAGGCCCTG CGGCGCCTGC GGCCCGACCT GACCTTCGCG
TGGAGCGCCG AGCCGGGCTC ACCTGCCGCA CGCGAGGTGG CGCCGTCGCA CATCGTGCGC
CGTGGCTCGT GGGGCTACGT CAGGATGCTC GCGCGGGCTC GCTACCTGGT CGACAACCAG
TCGTTCCCCC GGTACTTCCG CAAGCGTCCC GGCCAGGTCT ACCTCCAGAC CTGGCACGGG
ATCCCGCTCA AGCGGCTCGG GCTCGACGAG GTCCAGTTCT TCGACCCGGA ACAGCGCTCG
AGGCTGCGCC GGAACGTGCG CGCCTGGGAC GGCCTCGTGG TGCCGGGGCC GTACTTCGAG
CGCGTCTTCG TGCCGGCGTT CGACTTCCGC GGCGACCTGC TGCGGTACGG CAGCCCGCGG
AACGACCCGC TCGTGACGGA GGCGATCGAC GCCGCACGCG TGCGTGCGCT GCTCGACCTC
CCCGACGGCG CCCGCGTCGT CCTCTACGCG CCGACCTTCC GGGAGCGCGT CGGCCGTCGG
GAGTCGGTGG CCCGGCTCCC GTTCCAGCTC GACCGGTGGA TCGACGAGAT CGGCGGCGAC
GTCGTCCTCC TCGTGCGCTC GCACTACCTC AACAGGTTCG AGATCCCCGC GAGGTTCCAG
GGCTGGTGCC TCGACGTCTC GCGGCACCCC GACATCAACG AGCTGTACGC CGTGGCGGAC
GTCCTCGTCA CCGACTACTC CTCGGTGATG TTCGACTACG CGCTCCTGCG CCGCCCGATC
GTGACGTTCG CGCCGGACTA CGACGACTAC GTCCTCAGCT CGCGCGGCAC GTACTTCGAC
CTGCGCACCG AGGCGCCGGG CGACGTCGTC GAGACGGAGG ACGAGTTCTA TCCGGCCGTG
CGGCGCGGGC TCGACGACGG CGAGGTCGGC CCCCAGCACG AGCTCTTCGT CGAGCGGTAC
TGCGGGATCG AGGACGGGAA GGCCGCGGAC CGTGCCGCCG GCTACCTGCT GGAGCCGACG
CGGTGA
 
Protein sequence
MTAARREPAE RGDEARPDVT VVVISFNDAE HLADAVRSVT GQTLKNLEVI VSDDHSTDGT 
PDLVATLAAE DARVSYQRLP QNSGGCGAPR NVGLSHARGR YVMFLDSDDT LERHACKNLL
LAAEATGADV VSGKTERVEV DTGVRSPWYG NLYAEPRVVR SLDEFPELLH DTVSTNKLYR
RQFLLDSGLQ FPEGIHYEDL VFTARLYTTA PSIAIIPELV YNWHVYASEV RRSITNQRMS
ERNLADRLAA LDRVAEAYAV CGPEVQAEQA RKVLTHHLRL YLNDMAAADD AWAHAVVTAI
RPYVAAAGLP AVAALTPFER FLYACVLDGD VDGARQAVVG AQSGAMTGRF TRAGSAEVWT
PREGDTPPPE GTAERDLLTV DPRLVRIPHP AMPYCHEVVS VRHSGLGYVL DGVTSDPVGR
LEAELAELVV EVRTPSGAVL ARHPATTEAT GSVIRWSARI DAPARRGLRE WEPRTPVVVT
RLASGSVSTG PLRAGRAANQ LALRDGSALG RALGDRWVLE TEPYEPIELR IEATRRGHAV
RAAGKRAEAA LAPVQRLAAR GRAALEPTGP LGRAAYAALR RLPLEEDLAF FESYLGQSTQ
DSPRQVYEAL RRLRPDLTFA WSAEPGSPAA REVAPSHIVR RGSWGYVRML ARARYLVDNQ
SFPRYFRKRP GQVYLQTWHG IPLKRLGLDE VQFFDPEQRS RLRRNVRAWD GLVVPGPYFE
RVFVPAFDFR GDLLRYGSPR NDPLVTEAID AARVRALLDL PDGARVVLYA PTFRERVGRR
ESVARLPFQL DRWIDEIGGD VVLLVRSHYL NRFEIPARFQ GWCLDVSRHP DINELYAVAD
VLVTDYSSVM FDYALLRRPI VTFAPDYDDY VLSSRGTYFD LRTEAPGDVV ETEDEFYPAV
RRGLDDGEVG PQHELFVERY CGIEDGKAAD RAAGYLLEPT R