Gene Bcav_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1169 
Symbol 
ID7860628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1313855 
End bp1315702 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content75% 
IMG OID643865253 
Productglycosyl transferase family 2 
Protein accessionYP_002881191 
Protein GI229819665 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.390036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG GGACGCCGAC CGCTCGTGCC CGGGTGGTCG CCGTCGTCGT CACGTACAAC 
CGCCGTGACC TGCTGCGGGA GTGTCTCGAC GGGCTGGCCG CGCAGACGCG GCCGCTGGAC
GCCGTCGTCG TCATCGACAA CGCCTCGACC GACGGCTCCG GCGACGTCGC CCGGGCGCAC
CCGATCGCCG CCGACGTGCG CACGCTCGGC GAGAACCTGG GCGGCGCCGG CGGGTTCACC
GGCGGGATGG CGCTCGCGCT GGACGAGCAC GGCGCCGACT GGCTGTGGCT GATGGACGAC
GACACGATCC CGCGGCCGGG AGCGCTCGAG GCGCTGCTCG ACGTCGTCGA CGCGCATCCG
GCGCCGCTGT CGGTGCTCTC GAGCGCCGCC GTGTGGACGG ACGGGCGCGA CCACCCGATG
AACTCGCAGC GCGTCCGGCC GGGGGCGGGC GTGCGCGAGC TCGCCGTCGC CGCACGGCTC
GGCGTGACTC CGATCCGGAC GGCGTCGTTC GTGTCGCTCC TGCTGCGGGC CGAGGACGTC
CGCACGCACG GGCTCCCGTA CGCCGACTAC TTCATCTGGG GCGACGACTC GGAGTACTCC
GGGCGCCTCC TGCGGGACGG GTGGGGCGTG CGGGTGCCGG CGTCCGTCGT CGAGCACCGC
ACGAAGCTGT TCGGGTCGTG GGAGGCGGAC CCGGGCGACC GGTTCTACTA CGAGATCCGC
AACAAGCTCT GGCTGTACTG GCGCACGACG TCGTTCCGGT GGTGGGAGCG GGTGCTCTAC
CAGGGTTCCG CCACGCTCGG CTGGCTCGGC ACGATCCGGC GCTCGCCCAA CAAGGGCCTC
CTGCTGCGGC ACCTGCGGCA CGGCGTGCTC GACGCCGTCG CCGCACCTCC ACGCCCGACG
GCGGAGGTGC TGGCCGGCGA GCCGGCCGTC GCCGATGCGG TGCGCGAGCT CGAGGACGCG
GCCCGCGGCG GGGGAGAGCC GCGGGTGTCG GAGAACGCAC GCTGGGAGGC GGATGCTGCG
ACCCGGCCCG GGCCGGCGTT CTCCGTGCTG CTGCCGGTCT ACGCCGGTGA CGACGCCGCC
GCGCTGCGTC GGGCGTTCGA CTCCGCGACG CGTGAGCAGG AGCTGCCGCC CGACGAGGTC
GTGCTCGTCC AGGACGGCCC GGTGCCGGCG GCGCTCGCGG CGCAGCTCGC CGAGCTCACG
GCCAGCGACG ACGTCGCGGT GCGGCTGGTC GTGCTGCCCC GCAACGTCCG CCTCGCCGCG
GCCCTCCAGG CCGGTCTCGC GCAGAGCCGT CACGAGATCG TCGCGCGCGT CGACGCCGAC
GACGTGTCGC TGCCCTCGCG TTTCGCCCGC CAGGTGCCGC TCGTCGCCGA CGAGGGCTAC
GACGTCGTCG GGTCAGCCAT GCGGGAGTTC GACGCCGACG ACGCCGCCCC GTCCGTGGGT
CGGGTGCGCG ACGTCGTCAC GGAGCCGGAC GAGATCGCCC GGGCCGCGCG GTTCCGCAAC
CCTCTCAACC ACCCGACGGT GGTGTTCCGG CGCTCGGCGG TGCTGGCCGT CGGCGGCTAC
ACGGACCTGC CGTACATGGA GGACTACTGG CTCTGGGTGC GGATGCTCAG GGCCGGGGCG
CGCGTGACGA ACGTCGCGGA GCCGCTGGTG CTGTACCGCA CGGACGGCGT GTTCGCGCGG
CGCGGCGGGA TCGCGCCGCT GCGCTCGGAC TGGCGGTTCC AGTCCGCGGC GCACCGGGTG
GGCTTCGTCA CCGCCGCCGA GGCGGCGCGC AACCTCGCGC TCCGCACCGC GTACCGCCTG
GTGCCCACCC GGCTTCGTGA GGCGGGGTTC CGGCTCGTCA GCCGCTGA
 
Protein sequence
MSAGTPTARA RVVAVVVTYN RRDLLRECLD GLAAQTRPLD AVVVIDNAST DGSGDVARAH 
PIAADVRTLG ENLGGAGGFT GGMALALDEH GADWLWLMDD DTIPRPGALE ALLDVVDAHP
APLSVLSSAA VWTDGRDHPM NSQRVRPGAG VRELAVAARL GVTPIRTASF VSLLLRAEDV
RTHGLPYADY FIWGDDSEYS GRLLRDGWGV RVPASVVEHR TKLFGSWEAD PGDRFYYEIR
NKLWLYWRTT SFRWWERVLY QGSATLGWLG TIRRSPNKGL LLRHLRHGVL DAVAAPPRPT
AEVLAGEPAV ADAVRELEDA ARGGGEPRVS ENARWEADAA TRPGPAFSVL LPVYAGDDAA
ALRRAFDSAT REQELPPDEV VLVQDGPVPA ALAAQLAELT ASDDVAVRLV VLPRNVRLAA
ALQAGLAQSR HEIVARVDAD DVSLPSRFAR QVPLVADEGY DVVGSAMREF DADDAAPSVG
RVRDVVTEPD EIARAARFRN PLNHPTVVFR RSAVLAVGGY TDLPYMEDYW LWVRMLRAGA
RVTNVAEPLV LYRTDGVFAR RGGIAPLRSD WRFQSAAHRV GFVTAAEAAR NLALRTAYRL
VPTRLREAGF RLVSR