| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1166 |
|---|
| Symbol | |
|---|
| ID | 7860625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1310048 |
|---|
| End bp | 1311235 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865250 |
|---|
| Product | cell envelope-related protein transcriptional attenuator |
|---|
| Protein accession | YP_002881188 |
|---|
| Protein GI | 229819662 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGTAG AGCCGCGACA CGCCACGCAA CGCCGGAGGC GGCCGCTCCT GCGCCCGGTG
GGCCTCGCGT CGCTCGCGAT CGTGCTGTTC GCCGGCACCG CCACCGGGGC CGCCCTCCAG
CAGCTGCAGG GGAACGTGCA GATCGCCGAC GTCGACTCCG TGCTCGGCTC GGACCGACCG
AGCGCACCCG AACCCACCGA TCCCGGCGCC GGGCGTCCGC TCAACCTGCT CCTGCTCGGC
TCCGACACGC GCTCGGGGGA CAACGCGCAG ATCGCCGCAG AGGACGCCGC CGGCCCGGAC
ATGCGCTCGG ACGTCACGAT CCTGCTCCAC GTGTCAGCCG ACAGGTCCCG CGTGGAGGCG
GTCTCGATCC CGCGTGACTC GTGGGTGACG GTGCCGCCGT GCGAGCTGCC CGACGGGTCG
CAGAGCGAGC CCCGCACCGG CAAGTTCAAC CAGGCGTTCG CGATCGGCGG GGCGAGCGGC
GACGTCACGT ACGCCGCGGC GTGCACGATC CGGACGGTCG AGACGCTGAC GGGGATACGC
GTCGACGGCT TCCTCGCCAT CGACTTCCTC GGGTTCCGCG GGATGGTGGA CGCGCTCGGC
GGCGTCTCCG TCTGCCTCCC GGAACCGATC GCCGACCCGG ACGCGAACCT GTACCTCGAC
GCCGGCGAGC AGGTGCTCGA CGGCGACCAG GCACTCGGTC TCGCGCGGGC GCGCAAGACG
ATCGACGACG GGAGCGACGT CAGCCGGATC GACCGGCAGC AGCTGCTGCT CGCGGCGATC
GCGCGGCAGG CGACACAGGC GGAGCTGCTG ACCGACACGC CGCGCCTGTA CGCGTTCCTG
GACGCCCTGA CGTCCTCCGT CACGGCCGAC CCGCGGTACG GGTCGTTGAC GAGTCTCGCC
GGACTCGCGT CGTCGATGCG CGGGCTCGGC GCCGAGGACC TCACGTTCGT CACCGTGCCG
TGGGTGCCTC GCGGGGACGG GGCCAACGTG CTCTGGTCCG ACGACGCCGA CACGCTCTTC
GCGGCGGTCG CCGCCGACAC GCCGCTCACC GTGACGCCAC CGCCCGGCGT CGATGCCGGT
GGGACGCCCG CGCCAGAGCC CAGCCCGACA GGTGTGACCG GCACCCCGAG CCCGTCCGGC
CCGGCGTTCA CGGGGATCAC CGGGACCGCC GAGCCCGCCT GCCCGTGA
|
|---|
| Protein sequence | MRVEPRHATQ RRRRPLLRPV GLASLAIVLF AGTATGAALQ QLQGNVQIAD VDSVLGSDRP
SAPEPTDPGA GRPLNLLLLG SDTRSGDNAQ IAAEDAAGPD MRSDVTILLH VSADRSRVEA
VSIPRDSWVT VPPCELPDGS QSEPRTGKFN QAFAIGGASG DVTYAAACTI RTVETLTGIR
VDGFLAIDFL GFRGMVDALG GVSVCLPEPI ADPDANLYLD AGEQVLDGDQ ALGLARARKT
IDDGSDVSRI DRQQLLLAAI ARQATQAELL TDTPRLYAFL DALTSSVTAD PRYGSLTSLA
GLASSMRGLG AEDLTFVTVP WVPRGDGANV LWSDDADTLF AAVAADTPLT VTPPPGVDAG
GTPAPEPSPT GVTGTPSPSG PAFTGITGTA EPACP
|
|---|
| |