| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1121 |
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| Symbol | |
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| ID | 7859975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1260253 |
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| End bp | 1262088 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643865205 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002881143 |
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| Protein GI | 229819617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGAG CCGCAGTGCC CGCACGCCGC CTGAGCGCGG TGTTCCGCTG GTCCGCCGCG
CTGGTCCTGC TCTTCGTCGG GCTGACGCTG CTGTTCCCGA CGGAGGCCGA GGCGGTCCTG
GGGTACCTGC AACGGACGAT CATCCAGGGC TTCGGCTGGT ACTACGTGCT GCTGGTCGCG
GGGCTCGTCG TCGTCTGCGT CGTGGTGGCC GTGAGCAAGG CGGGCGACCT CACGCTGGGC
CGGGACGGGG AGCCGCCGGA GTTCTCCCTC GGGGCCTGGT TCGCGATGGT CTTCGCCTGC
GGGATGGGCA TCGGCCTCGT GTTCTGGGGG CCGGCGGAAC CGCTGACGCA CTTCGTCTCG
CCGCCACCGG GCGTGACCGG GAGTCAGGAG GAGATCGCGC AGCAGGCCAT GGGGCGCACG
TTCCTGCACT GGGGACCTCA GGCGTGGGCG ATCTACGCGT CCGTCGGGCT GTGCCTGGCG
TACTCGATCC ACCGCCGGCG CCGTCCGATC TCGATCCGGT GGGCGCTGCA GCCGTTGCTC
GGCGACCGCG TGAAGGGCCG ATGGGGGAGC GTGATCGACG TCGTCGCGGT GCTCGGGACG
ATCTTCGGCG TCGCCACAAC GCTGGGGTTC GGGGCGCTGC AGATCACCGC CGGCCTCGAC
CACAGCGGGA TCGTGAGTGC GTCGACGGCC GTGGAGCTGA CGGTGGTCGT GATCGTCACG
GCGATGGCGA CGATGTCCGT CGTGTCCGGG CTCGACCGCG GCATCAAGAT CCTGTCGAAC
CTCAACATGT ACGTCGCAGC CGGGCTCCTC GTGCTGGTGC TCGTCCTCGG CCCGACGCTC
TTCCTGCTGC GGGACCTCGT GCAGTCGGTG GGGTTCTTCC TGCAGAACTA CGTCGGGCTG
TCGACGGACC TGCTCGCGTT CGAGGGGGAG GCCGGCGCCG AGTGGCAGCA GCAGTGGACG
GTCTTCTACT GGGGCTGGTG GGTGTCCTGG GCGCCGTTCG TCGGCATGTT CATCGCGCGG
ATCTCCCGGG GGCGCACGAT CCGGCAGTTC GTGCTCGGCA CGATCCTGGC GCCGACGCTC
GTCACGTTCA CGTGGTTCCA GGTGTTCGGC GGGTCCGCCA TCTACCGGCA GATGTTCGGG
GCCGGCGACC TCGCCGGGGA CGACGGCACG AGCGTCGACC CGGACTACGT GATGTTCGAC
CTCCTGCAGG GCTTCCCGGG CGGCTCCGCA CTGGTGGGCA TCGTGCTCGT GCTCATCGCC
ATCTTCTTCG TCACGTCCGC CGACTCGGGA TCGCTGGTCG TGGACATGCT CGCGACCGGC
CGGGAGAAGA CGCCGGTGTG GAGCCGGGTG TTCTGGTGCG TGGTCATCGG GGCCGTGGCG
GTGGCGCTCC TCGCGCGCGG TGGACTGAGC GCGATGCAGA CGGCGACGAC GCTCATCGCC
CTGCCGTTCA CGCTCGTCAT CATCGGGATG GTTCTCGCTC TCGGTCGCGC CCTGCGCGCC
GAGCTCCTGG CGCGTCGCGC GGTCGACCTG GAGCGCGCAC GGCACGAGCT CACCGAGCAC
GTCGTGGGCG CCGTCTCCAC CGACGCCCGG CTGCAGGCGA CGATCGCTGC GGGCTGGGGG
GCCGAGTCGT CCGACCGCCT CCGTGGCGGG ACTCGACGCT GGCAGCAGCG ACTCCTGTCC
GCGCTCGACC GCCCGTCCGC GCTCGGCCTG GGCGCCGCCG AGGCCGGCGA GCGGACTCGG
TCGGGCGGGC TCGAGAACGG CGGCCCGGAG GCGGAGCAGC GCATCGACGC CTCGGGTGAC
GAAGCTCGCG ACGAGTCGGG CCCAGGTGTC ACCTAG
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| Protein sequence | MPRAAVPARR LSAVFRWSAA LVLLFVGLTL LFPTEAEAVL GYLQRTIIQG FGWYYVLLVA
GLVVVCVVVA VSKAGDLTLG RDGEPPEFSL GAWFAMVFAC GMGIGLVFWG PAEPLTHFVS
PPPGVTGSQE EIAQQAMGRT FLHWGPQAWA IYASVGLCLA YSIHRRRRPI SIRWALQPLL
GDRVKGRWGS VIDVVAVLGT IFGVATTLGF GALQITAGLD HSGIVSASTA VELTVVVIVT
AMATMSVVSG LDRGIKILSN LNMYVAAGLL VLVLVLGPTL FLLRDLVQSV GFFLQNYVGL
STDLLAFEGE AGAEWQQQWT VFYWGWWVSW APFVGMFIAR ISRGRTIRQF VLGTILAPTL
VTFTWFQVFG GSAIYRQMFG AGDLAGDDGT SVDPDYVMFD LLQGFPGGSA LVGIVLVLIA
IFFVTSADSG SLVVDMLATG REKTPVWSRV FWCVVIGAVA VALLARGGLS AMQTATTLIA
LPFTLVIIGM VLALGRALRA ELLARRAVDL ERARHELTEH VVGAVSTDAR LQATIAAGWG
AESSDRLRGG TRRWQQRLLS ALDRPSALGL GAAEAGERTR SGGLENGGPE AEQRIDASGD
EARDESGPGV T
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