| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1102 |
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| Symbol | ispH |
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| ID | 7859956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1240704 |
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| End bp | 1241699 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643865186 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_002881124 |
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| Protein GI | 229819598 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.958594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTGG CGGCGCCGCG CGGCTACTGC GCCGGCGTGG ACCGCGCCGT CGAGGCGGTG
GAACGTGCGC TCGAGCACTA CGGCGCCCCC GTCTACGTGC GCAAGGAGAT CGTGCACAAC
AAGTACGTCG TCGAGACGCT GACGGCGCGC GGCGCGGTGT TCGTCGAGGA GACGGACCAG
GTGCCCGAGG GGGAGCGCGT CATCTTCTCC GCGCACGGCG TCTCGCCGGC CGTGCACGCC
CAGGCGGCGG CGCGGTCCCT GCAGACGATC GACGCCACGT GCCCGCTCGT GACGAAGGTG
CACAAGGAGG CGGTCCGGTT CGCCCGGGAG GACTTCGACA TCCTGCTCAT CGGGCACGAC
GGGCACGAGG AGGTCGAAGG CACCGCGGGC GAGGCGCCGG ACCACGTGCA GCTCGTCAAC
GGCCCCGACG CCGTGGATGC CGTCTCGGTG CGCGACCCGG AGCGGGTCGT GTGGCTGTCC
CAGACGACGC TGTCGGTGGA CGAGACGATG GACACGGTGC GGCGCCTGCG CGAGCGGTTC
CCGGCCATGC AGGACCCGCC CAGCGACGAC ATCTGCTACG CCACCCAGAA CCGTCAGGTC
GCGGTGAAGA AGCTGGCGCC GGACTGCGAC CTCGTCATCG TCGTGGGGTC CGCGAACTCG
TCGAACTCCG TGCGCCTCGT GGAGGTCGCG CTCGACGCCG GGGCGCGCTC GTCCTACCGG
ATCGACCAGG CGTCCGAGCT GCGGGACGAG TGGTTCGACG GCGTCACGAC CGTCGGTCTC
ACCTCCGGTG CCTCGGTGCC GGAGATCCTC GTGCGCGACG TGCTCGACGC GCTCGCCACC
CGTGGGTACG GCGAGGTCGA GGAGGTCCGC ACGGCGACCG AGGACCTCAT GTTCTCGCTC
CCGCGGGAGC TGCGCGCCGA CCTCAAGACC GCGGGATCCG GGGACACGCG GCCGCGACGC
GAGAACCGAC GTTCGCTGAG CGTCGAGCCG GCCTGA
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| Protein sequence | MLLAAPRGYC AGVDRAVEAV ERALEHYGAP VYVRKEIVHN KYVVETLTAR GAVFVEETDQ
VPEGERVIFS AHGVSPAVHA QAAARSLQTI DATCPLVTKV HKEAVRFARE DFDILLIGHD
GHEEVEGTAG EAPDHVQLVN GPDAVDAVSV RDPERVVWLS QTTLSVDETM DTVRRLRERF
PAMQDPPSDD ICYATQNRQV AVKKLAPDCD LVIVVGSANS SNSVRLVEVA LDAGARSSYR
IDQASELRDE WFDGVTTVGL TSGASVPEIL VRDVLDALAT RGYGEVEEVR TATEDLMFSL
PRELRADLKT AGSGDTRPRR ENRRSLSVEP A
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