Gene Bcav_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1021 
Symbol 
ID7859794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1165103 
End bp1166308 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content74% 
IMG OID643865105 
ProductDNA polymerase IV 
Protein accessionYP_002881044 
Protein GI229819518 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.6656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0517924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGTGG TCACGGCGTC CATCCTCCAT GCCGACCTCG ACGCGTTCTA CGCCTCCGTC 
GAGCAGCGCG ACGACCCCCG GCTGCGCGGC CGGCCGGTGA TCGTCGGGGG CGGCGTCGTC
CTCGCGGCGA GCTACGAGGC CAAGCGGCTC GGCGTCGCGA CGGCGATGGG CGGCCGGCAG
GCGCTCGCCC TCTGCCCTCA GGCGATCGTC GTCCCGCCGC GGATGTCCGC GTACTCGGAG
GCGTCGAAGG CCGTGTTCGA CGTGTTCCGC GACACGACGC CGATGGTCGA GGGCATCTCG
ATCGACGAGG CGTTCCTCGA CGTCGCCGGC CTGCACCGCA TCGACGGACC GCCGGTAGAG
ATCGCGGAGC GGCTGCGCCG CCGCGTGCGC GAGGAGGTGG GGCTGCCGAT CACCGTCGGC
GTCGCACGCA CGAAGTTCCT CGCGAAGGTC GCGAGCGGCG TCGCGAAGCC CGACGGCCTG
CTGGAGGTCG CGCCCGACGG CGAGCTGGCG TTCCTGCACC CGCTCGCGGT GGACAAGCTG
TGGGGCGTCG GCGCCATCAC GGCCGAGAAG CTGCGCTCGT ACGGGATCTT CACCGTCGGC
GAGGTCGCGT CCCTGCCCGA GGGCATCCTG GTCTCCGTGC TGGGGCGCGC CCAGGGCCGC
GTGCTGCACG CCCTGTCCCA CGCGCGCTCC CCGGAGCGGG TGGTGGTCGG CCGGCGGCGC
GGGTCGATCG GGTCCCAGCG GGCGATCGGT CGGGGACCGC ACACGTCCGA GAGCGTCGAC
GCGACGGTCT GCGCGATCGT CGACCGGGTG ACGCGGCGCA TGCGGACGGC GCACCGCGTC
GGCCGCACCG TCGTGCTGCG GCTGCGCTTC ACCGACTACA CGCGCGCCAC GCGGTCGCAC
ACGTTCCCGC ACGCGACCGC GAGCACCGCG GAGGTGCTCG CGGCGGTGCG GATGCTGCTG
GCGTCGGTGG CGCCGCTGGT CGGGGAGCGA GGGCTGACGC TCGTCGGGAT CTCCGTGGCG
AACCTCGACG ACGACGACGT GACCCAGCCT CCCCTGCCGT TCGACACCCC GGGCGTGCAC
GCCGTCGGGG GCGCGCTCGA CGTCGCGCTC GACGGCGTCC ACGACAGGTT CGGCAGCAAC
TCGCTCACCC GCGCCGTGCT GCTGGGGCGC GATCAGGGGC TGTCCGTGCC GCTGCTTCCG
GACTGA
 
Protein sequence
MFVVTASILH ADLDAFYASV EQRDDPRLRG RPVIVGGGVV LAASYEAKRL GVATAMGGRQ 
ALALCPQAIV VPPRMSAYSE ASKAVFDVFR DTTPMVEGIS IDEAFLDVAG LHRIDGPPVE
IAERLRRRVR EEVGLPITVG VARTKFLAKV ASGVAKPDGL LEVAPDGELA FLHPLAVDKL
WGVGAITAEK LRSYGIFTVG EVASLPEGIL VSVLGRAQGR VLHALSHARS PERVVVGRRR
GSIGSQRAIG RGPHTSESVD ATVCAIVDRV TRRMRTAHRV GRTVVLRLRF TDYTRATRSH
TFPHATASTA EVLAAVRMLL ASVAPLVGER GLTLVGISVA NLDDDDVTQP PLPFDTPGVH
AVGGALDVAL DGVHDRFGSN SLTRAVLLGR DQGLSVPLLP D