Gene Bcav_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1007 
Symbol 
ID7859780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1146031 
End bp1147254 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content74% 
IMG OID643865091 
Productglycosyl transferase family 2 
Protein accessionYP_002881030 
Protein GI229819504 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.034979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AGGACCGGGC GCGCGGGGCC GCGCCGGAGG TCACGATCGT CGTGCCCACG 
TTCAACGAGG CGCCGAACGT CGCGCTCCTC GTGCAGCGGG TGACAGCGGC GGTGCGCGGC
ATCGACGCCG AGGTCGTGTT CGTGGACGAC TCGACCGACG CCACGCCCGA CGTCGTCCGC
GCCGTGGCGG CGACGTCGTC GATCCCCGTC CGGCTCATCC ACCGGGACGC GCCCGTGGGC
GGGCTCGGGG GCGCCGTCGT GGAGGGCATC GCCTCCTCCG GGGCGCGCTG GTGCGTCGTC
ATGGACGGCG ACCTGCAGCA CCCGCCGGAG CTCGTGCCCG AGCTCGTCGA GAGGGCACGC
GAGGGGGGAG CCGACGTCGT CGTCGCCTCC CGCTACGTGG GCGACGGCAG CAGCGAAGGC
CTCTCGAACG TCGTCCGCCA GGCCGTCTCC TCGGTGTCGA CGGCCGTGAC GCGAGCCATG
TTCCCGGTCC GCCTGCGGGA CTGCTCCGAC CCGATGACCG GCTTCTTCCT CGTCCGCCGC
GAGGCGATCG ACCTCGCGGC GCTGGAGCCT CGGGGATTCA AGATCCTGCT CGAGATCCTC
GCCCGGCACC GGCTCGCCGT CGCGGAGGTG CCGTTCGTGT TCGGCGAGCG GCACGCGGGG
GAGTCGAAGG CGTCGCTCGC CCAGGGCACC CGGTTCCTGC ACCAGCTGGC GGCGCTGCGG
TTCGGCCGCA TGTCGCGCTT CGCCGTGATC GGCGGCATCG GGGCCGTGGT CAACATCGCG
ATCGTCGCGC TGATGACGTG GCTCGGCGCC GGGTACCTCC TGGCGGCGAT CGTCGCGGCG
GAGACGACGA TCGTCGGGAA CTTCCTGCTC CAGGAGCGGT TCGTCTTCGC CGACCTGCGG
CACGAGGGCA AGCGCGGCTG GCAGAGGTTC GCGCAGTCGT TCACGTTCAA CAACGTCGAG
ACGGCGCTGC GCCTGCCGGT CATGGCCCTG CTCGTGGAGA CGATGCACGT GGCGGCTGTC
CTCGCCACCG CCATCACGCT GCTCGTCGCG TTCGTCGTCC GGTTCACGTT CCACTCGCGG
GTCGTGTACC GGCCCCGCGC CAGCACGCGG CGCGCCCGGC TCGAGGCGCC GGCCGCGCCG
GCCACGTCGG CCACGTCGGC CACGTCGCAG CCGGCGGCGG CCGAGCCGGC CCGCCCGCGC
ACCGTCCCCG CCGACGCGCG CTGA
 
Protein sequence
MTEQDRARGA APEVTIVVPT FNEAPNVALL VQRVTAAVRG IDAEVVFVDD STDATPDVVR 
AVAATSSIPV RLIHRDAPVG GLGGAVVEGI ASSGARWCVV MDGDLQHPPE LVPELVERAR
EGGADVVVAS RYVGDGSSEG LSNVVRQAVS SVSTAVTRAM FPVRLRDCSD PMTGFFLVRR
EAIDLAALEP RGFKILLEIL ARHRLAVAEV PFVFGERHAG ESKASLAQGT RFLHQLAALR
FGRMSRFAVI GGIGAVVNIA IVALMTWLGA GYLLAAIVAA ETTIVGNFLL QERFVFADLR
HEGKRGWQRF AQSFTFNNVE TALRLPVMAL LVETMHVAAV LATAITLLVA FVVRFTFHSR
VVYRPRASTR RARLEAPAAP ATSATSATSQ PAAAEPARPR TVPADAR