Gene Bcav_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0993 
Symbol 
ID7859766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1126276 
End bp1127181 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content75% 
IMG OID643865077 
Productglycosyl transferase family 2 
Protein accessionYP_002881016 
Protein GI229819490 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00285177 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCGAGA ACACCACCCC GCCCTCCGCC GTCGTCGTCG TGAGCTTCGG CTCGAGCGCG 
CTGCTCGAGG CGAACCTCGG CCCGCTCGAG GCGGCGGCGG GCAGGCCCGA CGTCGTCGTC
GTCGACAACT TCTCCGGAGC CGCCGAGCGG GCCACCATCA CCCGGCTCGC CGCCGAGCGG
GGCTGGGAGC TCGTGGCGCC GGAGCGCAAC CTCGGGTTCG GGGACGGCGT CAACCTCGGC
GCCGAGCGCG CGTTCGCCCG CGGCGCCGAG GTCGTGTGCG TGCTCAACCC GGACGCGCGG
CTGAGCGCCG ACGGCTTCGA CCGTCTCGTG CGGGCGGCCC ATGACGCACC GCGCGCGCTG
GTCGCCCCAC GCATGGTCGA CGGCGAGGGG CGGGTCTCGT TCGAGGGTGC GGAGGTGCGG
CTCCACGACG GGACGACGAC GCGGGCCGAC GTCACGACCG CCCGGCACCC GTGGCTGTCG
GGGGCGTGCC TGGCGTTCGG CCGGGAGGCC TGGGATCTCG TCGGCGGGTT CAGCAGCGAG
TACTTCCTCT ACTGGGAGGA CGTCGACCTG TCGTGGCGGA TGCGCGAGGC CGGGGGAGAG
CTGCGGTTCC TCGGCGACGT GACGGCCGTC CATGACGTCG GCGGGACCCA GAACCGGTCC
CGGTGGTCGA CCCGGTCGAC CACGTACGTC TACTTCAACT GCCGGAACCG GCTCGTGTTC
GCGGCGCACC ACCTGGAACC CCGGGCGGGT CGCACATGGC TGCGCCGCAG CCCGCGGTAC
GCACGCGACG TGCTGCTGCG CGGCGGGAGC CGGCTCGCGC TGCTGTCGCC GCGCGCCGTC
TGGGCGGCGG TGTCCGGGAC GCTCTCCGGA GCGCAGGTCC TCGTCCGAGG GGCGCGGCAT
GCCTGA
 
Protein sequence
MVENTTPPSA VVVVSFGSSA LLEANLGPLE AAAGRPDVVV VDNFSGAAER ATITRLAAER 
GWELVAPERN LGFGDGVNLG AERAFARGAE VVCVLNPDAR LSADGFDRLV RAAHDAPRAL
VAPRMVDGEG RVSFEGAEVR LHDGTTTRAD VTTARHPWLS GACLAFGREA WDLVGGFSSE
YFLYWEDVDL SWRMREAGGE LRFLGDVTAV HDVGGTQNRS RWSTRSTTYV YFNCRNRLVF
AAHHLEPRAG RTWLRRSPRY ARDVLLRGGS RLALLSPRAV WAAVSGTLSG AQVLVRGARH
A