Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0982 |
Symbol | |
ID | 7859754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1115077 |
End bp | 1115964 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865065 |
Product | ABC transporter related |
Protein accession | YP_002881005 |
Protein GI | 229819479 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.690635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00232341 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACGAGT CGGTCCTCTG GACCGCCGGC CTCGGTAAGC GGTACCGGTC CGCGTGGGCG TTGCGCGACT GCGACCTCGA CCTTCCGACG GGTCGCGTCA TCGCGCTGGT CGGCCCGAAC GGCGCAGGGA AGACCACCCT GCTGCGGATC ATCGCGGGAC TGCTGCGACC GACCGTCGGC GAGCTCCACG TCCTCGGGGC ACCGGCGGAC GGGTCGTCTC CGGCGACGCT CGCCGAGATC GGCTTCGTCG CGCAGGAGCA CCCGCTGTAC CGACGATTCC GCGTGCGGGA GCTGCTCCGG ATGGGGGACG AGCTCAACCT GCGGTGGGAC CAGGGGTTTG CCGAGGACCG GCTGCGGCGT CTCGGCATCC CGCTCGAACA GCGCGCCGGC GCGCTCTCCG GCGGTCAGCG TGCCCAGGTC GCCCTCACGC TCGCACTCGC GAAACGCCCT CGGCTCCTGA TCCTCGACGA ACCCGTCGCC AGCCTCGATC CGCTGGCCCG CCAGGCCTTC ATGCAGACGC TGATGGGTTC GGTGGCCGAG CACGACGTCA CCGTGCTGCT GTCGTCCCAC GTCCTGGCGG AGCTCGAACG CGTCTGCGAC TACCTGATCC TGCTGGCCGC CGGGCACGTC CAGGTCGCCG GCGAGATCGA CGGCCTTCTC GCCACGCACC GTCTGCTGAG CGGCCCCCCG GGCGCCCTCG TCGACTCCAT GCCGGGCGTC ATCCACGTGA CCACGGGAGA CCGTCGATCC GACGCCGTCG TGCGCACCGA CGACGGGGTC GACCTCCTCG GCTGGGAGTC CCATCCCGTG GGGCTCGAGG AGCTCGCCCT GGCCTACCTG AGACGTGCGG CGTCGCCCGG ATCGGAGATC CAGGAGCTGG TGTCATGA
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Protein sequence | MNESVLWTAG LGKRYRSAWA LRDCDLDLPT GRVIALVGPN GAGKTTLLRI IAGLLRPTVG ELHVLGAPAD GSSPATLAEI GFVAQEHPLY RRFRVRELLR MGDELNLRWD QGFAEDRLRR LGIPLEQRAG ALSGGQRAQV ALTLALAKRP RLLILDEPVA SLDPLARQAF MQTLMGSVAE HDVTVLLSSH VLAELERVCD YLILLAAGHV QVAGEIDGLL ATHRLLSGPP GALVDSMPGV IHVTTGDRRS DAVVRTDDGV DLLGWESHPV GLEELALAYL RRAASPGSEI QELVS
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