Gene Bcav_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0947 
Symbol 
ID7858168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1065593 
End bp1067095 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content74% 
IMG OID643865030 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_002880970 
Protein GI229819444 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3525] N-acetyl-beta-hexosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.376461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCAG TCATCCCCGT CCCGAGCCGC ACCGAGGCGC GCGAGGGCTG GTTCGACCTT 
GCCCGAGCAG TCCGGCTCGT CGTTCCCGAC GCGGCGGCGC CGGAGGCGGA GCGCGCACGC
GAGGCGCTCG CCCGGGTCGG CGCCCAGCGG GTCGAGGTCG TGACGCACGA CGACGGCGCG
CCGGGCGCGA TCGTCCTCAC GCTCGGCGAC GCGACGCTGC AGCCGCCCGC GGGGGTCACG
CGGCCGGACG GCGTCCGGCC GTCGGCGCCG CCGGCCGAGG AGTACTCGCT GAGCGTCGAC
CCCGACCGGG TGGTGGCGGA AGCCTCGACC CCGGAAGGGC TGCTGCGGGC GCTCGCGACG
CTCGAGCAGC TCGCGAGCGT GCGCGACGGC GGAGCGGGCC TCGAGGCCGT CCACGTCACC
GACGCTCCGC GGTACTCCTG GCGCGGCCTC ATGGTCGACA TCTCGCGCCA CTTCTTCGGC
GTCCCCGTGC TCAAGGACGT CGTCGACCTG CTCGCGCTGT ACAAGCTCAA CGTGCTGCAC
CTGCACCTCA GCGACGACCA GGGCTGGCGC CTGGACATCG GCTCCCGTCC GGAGCTCGCC
AAGCGCTCGG GCGACACGGA GGTCGGCGGC GGGGCGGGCG GCTTCCTCAC CGCTGACGAC
TACGTGACGC TCGTGACCTA CGCGGCGGAG CGCGGCGTCG TCGTCGTCCC CGAGATCGAT
CTGCCCGGGC ACACGAACGC CGCGCTGCAC GCGGTGCCGG AGCTCAACCC GTCGGGCGAG
GCGACGGCCG TCTACACGGG CACCGAGGTC GGGTTCTCCG CGCTCGACCT CGAGCTGCCC
GCCACGGAGC CGTTCCTGCG CGACGTGCTC GGCGAGGTCG CCGCGCTCAC GCCCGGCGAC
TACCTCCACA TCGGTGGCGA CGAGGTCAAG ACCATGACCC CGGAGGCGTA CGCCGCCTTC
GTCGAGAAGG CCGCGGAGAT CGTCGTCGAG GCCGGCAAGC GGCCGGTCGT GTGGCAGGAG
GGCGGCAAGG CGCAGCTGCC GGACGGCGCC GTCGTGCAGC TGTGGGAGTC GAACAGCTCG
CCGGAGGCCG TGCTCGAAGC AGCGGCCCGC GGCGCTCGGG TGGTGCTCTC ACCCGGCAAG
CACGTGTACC TCGACATGAA GTACCACGCG GACTATTCCC TGGGCCTGGC CTGGGCTGGC
CTCGTCGACG TGCGCGAGAG CTACGACTGG GACCCGGACG CGTACACGCC CGGGCTCGAC
CCCGCGGCGA TCGACGGCGT CGAAGCGGCG CTCTGGACGG AGACGGTGAC GACGCGCGAG
GAGCTGTTCA CGATGCTGCT CCCGCGGCTC GCCGCCGTCG CGGAGGTCGC GTGGTCGGCG
CAGGACGCTC GCGCGCTCGA CGACGTGGCA CGGCGTCTGG CCGATCACGC GGCCCTGTGG
CAGGAGCGCG ACTGGGCGTT CCACCCGAGC GACCAGGTGC CGTGGCCGAG CCTCACCCGG
TGA
 
Protein sequence
MPAVIPVPSR TEAREGWFDL ARAVRLVVPD AAAPEAERAR EALARVGAQR VEVVTHDDGA 
PGAIVLTLGD ATLQPPAGVT RPDGVRPSAP PAEEYSLSVD PDRVVAEAST PEGLLRALAT
LEQLASVRDG GAGLEAVHVT DAPRYSWRGL MVDISRHFFG VPVLKDVVDL LALYKLNVLH
LHLSDDQGWR LDIGSRPELA KRSGDTEVGG GAGGFLTADD YVTLVTYAAE RGVVVVPEID
LPGHTNAALH AVPELNPSGE ATAVYTGTEV GFSALDLELP ATEPFLRDVL GEVAALTPGD
YLHIGGDEVK TMTPEAYAAF VEKAAEIVVE AGKRPVVWQE GGKAQLPDGA VVQLWESNSS
PEAVLEAAAR GARVVLSPGK HVYLDMKYHA DYSLGLAWAG LVDVRESYDW DPDAYTPGLD
PAAIDGVEAA LWTETVTTRE ELFTMLLPRL AAVAEVAWSA QDARALDDVA RRLADHAALW
QERDWAFHPS DQVPWPSLTR